2588 days ago
CLA: Contig-Layout-Authenticator
...g both simulated and real sequence datasets. CLA is a user friendly tool that requires a single command line input to generate ordered scaffolds. Script https://sourceforge.net/...2553 days ago
Genetic-mapper: SVG Genetic Map Drawer
Genetic-mapper is a perl script able to draw publication-ready vectorial genetic maps. Perl script for creating a publication-re...2509 days ago
2501 days ago
slacTree: SVG Large Annotated Circular Tree drawing
A simple, extensible, Perl script for producing figures of large phylogenetic trees. While there are m...ore than 1000 taxa with custom annotations Because it is a single Perl script with very few dependencies, i...2494 days ago
MinION_GC: An R script to do some QC on MinION data
Other tools focus on getting data out of the fastq or fast5 files, which is slow and computationally intensive. The benefit of this approach is that it works on a singl...2341 days ago
2335 days ago
Building Web UIs With Mojolicious Perl
...development and production server and many other features one needs to build a web application. It's easy to install, has an applciation generator script and many plugins and extensio...2317 days ago
Dot, an interactive viewer for genome-genome comparison
...cs. Dot supports the output of MUMmer’s nucmer aligner the most commonly used software method for aligning genome assemblies. A quick script called DotPrep.py converts th...2299 days ago
RGFA: powerful and convenient handling of assembly graphs
...on not available to the assembler. We illustrate a use case, in which the assembly of a repetitive metagenomic fosmid insert was completed using a script based on RGFA. https://githu...1563 days ago