Bioinformatics software for biologists in the genomics era
...ser-friendly software needed and the scripting/programming infrastructure often employed for the analysis of large numbers of genes, long genomic segments and groups of sequences. We s...3799 days ago
InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
InfoGenomeR is the Integrative Framework for Genome Reconstruction that uses a breakpoint graph to model the connectivity among genomic segments at the genome-wide scale. InfoGenomeR i...1109 days ago
2166 days ago
2658 days ago
2647 days ago
2518 days ago
CHSMiner: a GUI tool to identify chromosomal homologous segments
Background The identification of chromosomal homologous segments (CHS) within and between genomes is essential for comparative genomics. Various processes including insertion/deleti...2372 days ago
MGcV: the microbial genomic context viewer for comparative genome analysis
...an interactive web-based visalization tool tailored to facilitate small scale genome analysis. To start using MGcV: Supply your genes/genomic segments/phylogenetic tree of interest...2301 days ago
Metassembler: merging and optimizing de novo genome assemblies
Metassembler combines multiple whole genome de novo assemblies into a combined consensus assembly using the best segments of the individual assemblies. Genome assembly projects typica...2202 days ago
genoPlotR - plot gene and genome maps project!
...n table files and blast results, as well as home-made tabular files. Features Linear representation of several segments of DNA Comparisons represented by areas between the segments (like Artemis, for example)...1984 days ago