Results for "server"

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  • dbCAN: a web server and DataBase for automated Carbohydrate-active enzyme ANnotation

    dbCAN is a web server and DataBase for automated Carbohydrate-active enzyme ANnotation, funded by the BioEnergy Science Center of the DOE. Similar resources on the web include CAZy database and CAT. All data in dbCAN are generated based on the family c...

    Tags: dbCAN, web, server, DataBase, automated, Carbohydrate, active, enzyme, ANnotation

    2526 days ago

  • FRODOCK 2.0: fast protein–protein docking server

    frodock: a user-friendly protein–protein docking server based on an improved version of FRODOCK that includes a complementary knowledge-based potential. The web interface provides a very effective tool to explore and select protein–protein models and interactively screen them aga...

    Tags: FRODOCK, fast, protein–protein, docking, server, protein

    2021 days ago

  • KOBAS: a web server for gene/protein functional annotation and functional gene set enrichment

    KOBAS 3.0 is a web server for gene/protein functional annotation (Annotate module) and functional gene set enrichment(Enrichment module). For Annotate module, it accepts gene list as input, including IDs or sequences, and generates annotations for each gene based on multiple databases about ...

    Tags: KOBAS, web, server, gene, protein, functional, annotation, functional, gene, set, enrichment, KEGG

    2018 days ago

  • How to set up SSH on Ubuntu 18.04

    SSH, also known as Secure Shell or Secure Socket Shell, is a network protocol that gives users, particularly system administrators, a secure way to access a computer over an unsecured network. SSH also refers to the suite of utilities that implement the SSH protocol. Here are the commands used t...

    Tags: SSH, server, connection, ubuntu, homeworking

    1984 days ago

  • BUSCA: an integrative web server to predict subcellular localization of proteins

    BUSCA (Bologna Unified Subcellular Component Annotator) is a web-server for predicting protein subcellular localization. BUSCA integrates different tools to predict localization-related protein features (DeepSig, TPpred3, PredGPI and ENSEMBLE3.0) as well as tools for discriminating subcellular lo...

    Tags: BUSCA, integrative, web, server, predict, subcellular, localization, proteins

    1907 days ago

  • Bioinformatics web development course

    This web development course, targeted at Biology and Bioinformatics students, aims at teaching from scratch all the skills needed to setup a fully working Linux web server and to develop and deploy web applications for Bioinformatics. No previous programming knowledge is assumed. By following th...

    Tags: Bioinformatics, server, web, development, course

    1635 days ago

  • DMINDA2: an integrated web server for DNA motif identification and analyses

    DMINDA (DNA motif identification and analyses) is an integrated web server for DNA motif identification and analyses More at http://bmbl.sdstate.edu/DMINDA2/ https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4086085/

    Tags: DMINDA2, integrated, web, server, DNA, motif, identification, analyses

    1547 days ago

  • genomics public data links !

    List of publically available databases on google server. More at https://software.broadinstitute.org/gatk/download/bundle ftp://ftp.ncbi.nlm.nih.gov/snp/organisms/human_9606/VCF/GATK/. ftp://ftp.broadinstitute.org/bundle/hg38/hg38bundle/

    Tags: google, server, list, database, ngs, cloud, public, genomics

    1537 days ago

  • QuartataWeb: user-friendly server developed for polypharmacological and chemogenomics analyses.

    Data on protein-drug and protein-chemical interactions are rapidly accumulating in databases such as DrugBank and STITCH. These data usually reflect observed interactions, while the lack of data for a given protein-drug/chemical pair does not necessarily mean the lack of interactio...

    Tags: QuartataWeb, user-friendly, server, developed, polypharmacological, chemogenomics, analyses

    1488 days ago

  • CSAR-web: a web server of contig scaffolding using algebraic rearrangements

    CSAR-web is a web-based tool that allows the users to efficiently and accurately scaffold (i.e. order and orient) the contigs of a target draft genome based on a complete or incomplete reference genome from a related organism.  CSAR-web can serve as a convenient and useful scaffolding tool ...

    Tags: CSAR-web, web, server, contig, scaffolding, algebraic, rearrangements

    1480 days ago