Results for "sets"
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DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
...odels for both global and local alignment and for variant calling. We have evaluated the performance of DAVI against existing state-of-the-art tool sets and found that its accuracy a...1158 days ago
- ...(Orange Canvas). The latter is also suitable for non-programmers. Orange Bioinformatics provides access to publicly available data, like GEO data sets, Biomart, GO, KEGG, Atlas, Ar...
3511 days ago
- ...provides basic data structures for efficient data manipulation (mostly genomic sequences, alignments, variation etc.), as well as specialized tool sets for various analyses. It also...
3020 days ago
RNA-Seq De novo Assembly Using Trinity
...clusters and constructs complete de Bruijn graphs for each cluster. Each cluster represents the full transcriptonal complexity for a given gene (or sets of genes that share sequences...2977 days ago
MEDEA: Comparative Genomic Visualization with Adobe Flash
...s increasingly important. Using the power of the human visual system to detect trends and spot outliers is necessary in such large and complex data sets. More at http://www.bro...2943 days ago
GATB : Genome Analysis Toolbox with de-Bruijn graph
... Genome Analysis Toolbox with de-Bruijn graph (GATB) provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core des...2941 days ago
- ...-copy orthologs selected from OrthoDB. BUSCO assessments are implemented in open-source software, with comprehensive lineage-specific sets of Benchmarking Universal Sin...
2929 days ago
- ...program for estimating the evolutionary distance between closely related genomes. These distances can be used to rapidly infer phylogenies for big sets of genomes. Because andi does...
2926 days ago
- ...age plots (TAGC plots) to visualise the contents of genome assembly data sets as a QC step Blaxter Lab, In...age plots (TAGC plots) to visualise the contents of genome assembly data sets as a QC step. This repositor...
2895 days ago
- ...The primer is also designed to be self-contained and hands-on, meaning that you only need to install SAMtools, and no other tools, and sample data sets are provided. Terms in bold a...
2885 days ago
