Results for "short reads mapping"
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Short-read assembly using Spades !
If we only had Illumina reads, we could also assemble these using the too...illumina_R1.fastq.gz: the Illumina forward reads illumina_R2.fastq.gz: the Illumina reverse reads Assemble Run Spades: s...ds --careful minimizes mismatches and short i...839 days ago
- Short Read Simulators With the popularity of next-generation seque...Currently, many of the popular short read simulators are designed to simulate reads mimicking many Illumina, 454.... Listed below are some popular short read simulators. Links to the...lators are designed to simulate reads m...
597 days ago
- Types of SSRs (simple sequence repeats), SSRs are short DNA sequences cons...
437 days ago
Bioinformatics tools for genome assembly !
...based assembler optimized for short-read sequencing data. SO...-based assembler designed for short reads, widely used for assembling l...n assembler designed for long reads, particularly suited for PacB...ybrid assembler that combines short and long reads for circular b...300 days ago
Mitochondrial genome assembly tools !
Mitochondrial genome assembly tools are specialized software and algorith...me assembly from PacBio high fidelity reads MITObim: MITObim is a tool s...nd algorithm and is suitable for both short-read and long-read data. MIT...ssembly, especially when working with short-r...256 days ago
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