Results for "single-molecule technologies"
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Function WiseScaffolder is a stand-alone semi-automatic application for genome scaffolding of pre-assembled contigs using mate-pair data. It also produces editable scaffo...2850 days ago
- Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox for interactively analyzing microbiome data. All the interactive tools you need in one ap...
2838 days ago
- Genome STRiP (Genome STRucture In Populations) is a suite of tools for discovering and genotyping structural variations using sequencing data. The methods are designe...
2795 days ago
- Redundans pipeline assists an assembly of heterozygous genomes.Program takes as input...top for small-to-medium size genomes flexible toward many sequencing technologies (Illumina, 454 or Sanger) and...
2800 days ago
- R-chie allows you to make arc diagrams of RNA secondary structures, allowing for easy comparison and overlap of two structures, rank and display basepairs in colour a...
2800 days ago
OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wikipe...that enables scaffolding with long-reads from third-generation sequencing technologies (PacBio or Oxford Nanopore)....2792 days ago
- These tutorials are written for hundreds of bioinformaticians trying to cope with large volume of next-generation sequencing (NGS) data. NGS technologies brought a dramatic shift in t...
2796 days ago
- Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 CPU ho...
2771 days ago
- The accurate description and annotation of structural variants can be complex. This is due to the different resolution that variants are reported from traditional&nb...
2769 days ago
- Metagenomics sequencing projects collect samples of DNA from un...sity present in a sample. The newest sequencing technologies have simultaneously made meta...by producing shorter read lengths than previous technologies. Methods for classifying sequ...
2761 days ago
