Results for "sites"
Top-level pages
...establish the correct order of sequence contigs to obtain one continuous sequence; find the tranlation and transcription initiation sites, find promoter sites, define open reading frames (...3958 days ago
- ...Bioinformatics Algorithms Links Dynamic Programming Particularly good sites... •http://www.cis.upen...http://www.qucis.queensu.ca/home/cisc365/javascript/dp1/index.htmlOther sites...•http://bioweb.ncsa.ui...
3957 days ago
Phylogenetic for Bioinformatics
...op/April2002/lectures/Olken.pdf MrBayes: A program for the Bayesian inference of phylogenyhttp://golab.unl.edu/teaching/SBseminar/manual.pdf Web sites providing software for the co...3957 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...claims to have the World's Best Introduction to Sed; take a look and judge for yourself. Bruce Barnett's sed tutorial. Links to other useful sites The SEQanswers online commun...3790 days ago
List of In-silico Binding Site Prediction Tools
...stematically identify binding sites of proteins. In addition to t...structurally similar binding sites sharing atomic similarity det...detects common ligand binding sites in a set of evolutionarily re...riedness of potential binding-sites. Conclusion: The pocket predi...3754 days ago
Next generation sequencing in R or bioconductor environment
...algorithm was developed for detecting transcription factor (TF) binding sites in a large number of enriched...esPeak BayesPeak is a peak calling package for identifying DNA binding sites of proteins in ChIP-Seq exper...3635 days ago
Commercial and public next-gen-seq (NGS) software
...tes, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poi...q data relative to controls. The first pass identifies putative binding sites and compensates for variation...3529 days ago
Software packages for next gen sequence analysis
...tes, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poi...q data relative to controls. The first pass identifies putative binding sites and compensates for variation...3253 days ago
Binding Site Prediction in Protein !
...s that can assist in prediction of interaction sites on protein surface and tools...DO Identification protein interaction sites. It uses sequence conservatio...estraints. Ligand Binding Sites 3DLigandSite ...2213 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...and configurations” Output: “table of somatically mutated sites and associated information. T...ion of data from ClinVar, dbSNP, 1000 genomes (plus many other external sites); Only GRCh27 coordinates sup...2919 days ago
