Results for "snp"
Top-level pages
List of pharmacogenomics companies worldwide
...com www.mftservices.de www.ncgr.org www.ramaciotti.unsw.edu.au www.rikengenesis.jp www.SABiosciences.com www.sequensysbio.com www.servicexs.com www.snp-genetics.com www.takara-bio.c...3930 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...25(14):1754-60, 2009. PubMedCentral Improving SNP discovery by base alignment q...ome alignment & comparisons] Searching for SNPs with cloud computing. Langme...igest RADseq: an inexpensive method for de novo SNP discovery and genotyping in m...3788 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...ting and Evaluating Software: Simulates complex SNP models with pure, strict epis...ization of the program GenomePop just to manage SNPs under more flexible and usef...te matrices. http://www.cibiv.at/software/sissi/SNPsim Coalescent simulation of h...3746 days ago
Next generation sequencing in R or bioconductor environment
...wide variety of alignment tools. Documentation Samtools Website BWA (Burrows-Wheeler Alignment) Website Additional tools for SNP analysis: snpMatrix BSgenome BSgenome pro...3633 days ago
Commercial and public next-gen-seq (NGS) software
...igs before assembly. Includes SNP detection, CHiP-seq, browser...and filter contigs, look for snps and indels., filter snps, do...sive supporting tools for DIP/SNP detection, etc. C++ source MO...st mapping of Illumina reads SNP/Indel Discovery ssahaSNP - ss...3527 days ago
Apps for Busy Bioinformatics Researchers !!!
...yeast gene information has also been updated to March 2013. More @ https://itunes.apple.com/us/app/yeastgenome/id520868597?mt=8 SNPdbe: iPhone/iPad SNPdbe — SNP database of ef...3550 days ago
Software packages for next gen sequence analysis
...igs before assembly. Includes SNP detection, CHiP-seq, browser...sive supporting tools for DIP/SNP detection, etc. C++ source *...version uses a BWT. Can call SNPs and INDELs. Author is Ruiqia...-incarnation of the PolyBayes SNP discovery tool developed by G...3251 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ncing data Golden Helix: SNP and Variation Suite used f...aller Description: detects SNPs and small indels from diploi...ither VCF or ANNOVAR SOAPsnp Description: based on Baye...abase contains physical-based SNP annotations and functional an...2917 days ago
- ...GGGGGG) InDel InDel stands for Insertion or deletion. A form of structural variation in which a DNA segment is either deleted or inserted. SNP SNP stands for Single Nucleotide...
2878 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...imeRScope/wiki FastGT Genotyping of known SNV/SNP variants directly from raw NG...navarrogomez/phy-mer LAVA Genotyping of known SNPs (dbSNP and Affymetrix's Geno...ware (Python) https://github.com/fanhuan/AAF kSNP v3 Reference-free SNP identi...2380 days ago
