Computer simulation of genetic mechanism !!
Computer simulation is the discipline of designing a mode...m A tool to generate collections of synthetic reads that reflect the diverse taxo.../ pIRS Profile-based Illumina pair-end reads simulator https://code.google...3113 days ago
Various scholarships around the world !!
This page provides information on scholarships for developing countries ...plication Deadline: November 9th Commonwealth Split-site (PhD) Scholarships for D...urses: Scholarships are available for pursuing Split...2955 days ago
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Structural variation: the hidden genomic treasure
...of detection in next generation sequencing data (paired end mapping, split reads, and depth of coverage), arra...-StructuralVariants.pdfBreakSeq, structural variant genotyping using split reads Link CopySeq, genot...2841 days ago
Software and Tools to detect structure variation with long reads !!
...t detects all types of SVs using evidence from split-read alignments, high-mismatc...signed to exploit the high mappability of long reads (i.e., greater than 10,000 bp...ead discordance and soft-clipped tails of long reads to identify structural varian...2746 days ago
String graph based genome assembly software and tools !
In graph theory, a string graph ...phase corrects base calling errors in the reads. The second phase assembles contigs from the corrected reads. The third phase uses paired...l advantages in running FSG on multiple threads. Moreover, we have studied th...2467 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time devic...aphMapMapper for long and error-prone readshttps://github.com/isovic/grap.../ marginAlignTools to align nanopore reads to a referencehttps://github....blers for Oxford Nanopore MinION long reads LQSDALIGNER, Celera OLC Nano...2459 days ago
BBTools for bioinformatician !
BBMap.sh Mapping Nanopore reads BBMap.sh has a length cap of 6kbp. Reads longer than this will be brok...GGGAAAAA In this case, all reads starting with "AAAAACCCCCTTTT...ault, "filterbyname" discards reads with names in your name list,...2409 days ago
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