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BIMA V3: an aligner customized for mate pair library sequencing
...equencing is an effective and economical method for detecting genomic structural variants and chromosomal abno...eads, paired-end read contamination, chimeras, etc.), and presence of structural variant breakpoints within re...2698 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
...ntinuously rising, allowing for comparative analyses of genomic variation. Such analyses are often based on whole-genome alignments to elucidate structural differences arising from inse...2663 days ago
2634 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool Both are cont...tra-read discordance and soft-clipped tails of long reads to identify structural variants.2623 days ago
Pacbio Long Reads Compatible Software and Tools
...sts commercial software. Know of any other open source software for PacBio data? Email us. Software categories: De novo assembly Structural Variations Detection Referen...2607 days ago