Results for "structural and sequence variation"
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Google Genomics provides an API to store, process, explore, and share DNA sequence reads, reference-based alignments, and variant calls, using Google's...tructure. Store alignments and variant calls for one genome...re data by slicing alignments and variants by genomic range across o...3482 days ago
- Explore genetic variation interactively. Compare entire cohorts in s...me-wide association, allelic frequency and more. Process big genomi...yses like principal component analysis and Hard...ome or a million using Google Genomics and take advantage of the sam...
3420 days ago
- The Bio.SeqLoc modules in seqloc are designed to represent positions and locations (ranges of positions) on sequences, particularly nucleotide sequences. My original motivation for writing these packages was handing the locations of genes in eukaryotic genomes. Handle sequence locations...
3410 days ago
- Some of the useful bioinformatics scripts. For example ... contig-stats.pl is a Perl script that will automatically describe features of a sequence assembly. http://milkweedgenome.org/?q=scripts
3355 days ago
- ...ieced together in a very easy and flexible manner to perform both simple and complex bioinformatics tasks....LiD/ABi, 454/Roche. But thier sequence format is different, also the...ere are many pipeline for raw sequence quality analysis and contr...
3228 days ago
Assembly and diploid architecture of an individual human genome via single-molecule technologies
The research work shows that it is now possible to integrate single-molecule and high-throughput sequence data to generate de novo assembled genomes that approach reference quality. https://www.genomewe...3215 days ago
Resolving the complexity of the human genome using single-molecule sequencing
The human genome is arguably the most complete mammalian reference assembly yet more than 160 euchromatic gaps remain and aspects of its structural variatio...lexity of the human genome in the form of variation of longer and more complex repetitive DNA that ca...3215 days ago
Simons Genome Diversity Project
Complete genome sequences from more than one hundred diverse human popu...ions All genomes in the dataset were sequenced to at least 30...ogy. The sequencing reads were mapped and genotyped using a customized proce...d matching the human genome reference sequence, and deter...1086 days ago
Barrnap: Bacterial ribosomal RNA predictor
Barrnap predicts the location of ribosomal RNA genes in genomes. It supp...,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S). It takes FASTA DNA sequence as input, and write GFF3 as output. It uses the...64-bit Linux and Mac OS X are included and will...2544 days ago
- MetaPred2CS Web server is a meta-predictor based on Support Vector Machine (SVM) that combines 6 individual sequence based protein-protein in...methods: in-silico two hybrid (i2h) and mirror tree (MT) methods and 4 gen...
2614 days ago
