List of In-silico Binding Site Prediction Tools
...: http://www.ncbi.nlm.nih.gov/Structure/ibis/ibis.cgi is the NCBI Infe...FunFOLD Binding Site Residue Prediction Server: BACKGROUND: The accur...fully automated approach for structure based function prediction usin...first rank itself. 77% of the predictions had at least 50% overlap wit...3757 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of San...local biases in the genome sequence, allowing for more sensitive and robust prediction. Written by Yong Zhang and Ta...3532 days ago
3509 days ago
Apps for Busy Bioinformatics Researchers !!!
...=8 SNPdbe: iPhone/iPad SNPdbe — SNP database of effects, with predictions of computationally annotate...nd SIFT algorithms and augmented with experimentally derived function/structure information and disease associ...3554 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of S...local biases in the genome sequence, allowing for more sensitive and robust prediction. Written by Yong Zhang and Ta...3255 days ago
Binding Site Prediction in Protein !
...and tools for predicting the structure of the intermolecular complex...kets and cavities in proteins structure, and quantitation of their vo...PyMOL Binding Site Prediction ConSurf Identificat...The server utilizes protein-structure prediction to provide structural models...2215 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...or analysis of single RNA/DNA structures) software pipeline; tailored...of the linkage disequilibrium structure, and GWAS simulation” I...gene mapping; “genomic prediction and variance component estima...e, fixes incorrect amino acid predictions that are caused by multiple...2921 days ago
Genome Assembly Tools and Software - PART1 !!
...ly formatted to specific data structure. Currently, existing data structure for this usage can be predomi...oach which adopts greedy-like prediction strategy for assembling read...l approach to reconstruct the structure of a viral quasispecies from n...2698 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated from two diffe...hat also possessed that feature. homology -- Two structures are considered homologous wh...erited from a common ancestor which possessed the structure....2475 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantifi...ing ChimeRScope Fusion transcript prediction using gene k-mers profil...and non-negative least squares for prediction) Web service Software (Pytho...le.com/p/d2-tools/ VirHostMatcher Prediction of hosts from metagenomic vir...2384 days ago