BBTools for bioinformatician !
...It works by pulling kmers from each input read, and testing whether it has been seen before, then storing it in a table.The bottom line, "first", tracks whether the first kmer of the...2290 days ago
Illumina based assembly pipeline steps !
...ge analysis (Pangolin) Clade assignment, mutation calling and sequence quality checks (Nextclade) Individual variant screenshots with annotation tracks (ASCIIGenome) Intersect...897 days ago
UCSC SARS-CoV-2 Genome Browser
...https://genome.ucsc.edu/covid19.html) is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation tracks and new features, including c...870 days ago
HiGlass: a tool for exploring genomic contact matrices and tracks.
HiGlass is a tool for exploring genomic contact matrices and tracks. Please take a look at the examples and documentation for a description of the ways that it can be configured to ex...2174 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...from 1000 Genomes Project Accepts downloaded tracks from dbSNP Also accepts: FAS...stem from Life Technologies” Annotation tracks from Ensembl DNAnexus...e data; annotation using public data or custom tracks, automated primer desing for...2928 days ago
BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
...are mouse or human, it does not matter whether they map ambiguously within human, only whether they are ambiguous between human and mouse. BBSplit tracks this additional ambiguity inf...2334 days ago
2884 days ago
Clinical Genomics & Informatics Europe at Lisbon, Portugal
Bio-IT World and Cambridge Healthtech Institute's fifth international Clinical Genomics & Informatics Europe conference will feature four main tracks on Clinical Exome Sequencing,...3936 days ago
319 days ago
HiGlass: a tool for exploring genomic contact matrices and tracks.
HiGlass is a tool for exploring genomic contact matrices and tracks. Please take a look at the examples and documentation for a description of the ways that it can be configured to explore and compare contact matrices. To load private data, HiGlass can be run locally within a Docker container. Th...Tags: HiGlass, tool, exploring, genomic, contact, matrices, tracks, Visualization
2174 days ago
pyGenomeTracks: Standalone program and library to plot beautiful genome browser tracks
pyGenomeTracks aims to produce high-quality genome browser tracks that are highly customizable. Currently, it is possible to plot: bigwig bed (many options) bedgraph links (represented as arcs) Hi-C matrices (if HiCExplorer is installed)Tags: Standalone, program, library, plot, beautiful, genome, browser, tracks
2023 days ago
1540 days ago
Comment on "Python and BioPython Tutorial"
Python leaning resources http://www.codecademy.com/tracks/python3739 days ago