Results for "transcripts"
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EvidentialGene: tr2aacds, mRNA Transcript Assembly Software
...s much better than too few. It allows one then to apply biological criteria to pick out the best ones. Don't be misled by the "right number" of transcripts that one or other transcript...2043 days ago
kallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
kallisto is a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads...1945 days ago
- ...reads to determine the true origin of every transcripts.Such cross contaminations can...y.Our approach first determines a subset of transcripts that are suspiciously similar...nd quantifies the "expression level" of all transcripts successively using every samp...
1944 days ago
StringTie Transcript assembly and quantification for RNA-Seq
...and highly efficient assembler of RNA-Seq alignments into potential transcripts. It uses a novel network flow...sp;de novo assembly step to assemble and quantitate full-length transcripts representing multiple splice...1426 days ago
- ...h connect two nodes via either of their respective ends paths, describe genomes, sequence alignments, and annotations (such as gene models and transcripts) as walks through nodes conne...
1559 days ago
RNA-seq workflow: gene-level exploratory analysis and differential expression
...fferential expression workflow using Bioconductor packages. We will start from the FASTQ files, show how these were quantified to the reference transcripts, and prepare gene-level count...939 days ago
- To convert a VCF into a MAF, each variant must be mapped to only one of all possible gene transcripts/isoforms that it might affect. But even within a single isoform, a Missense_Mutatio...
870 days ago
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