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...from: https://github.com/yechengxi/DBG2OLC/raw/master/Manual.docx To use precompiled versions,please go to: https://github.com/yechengxi/DBG2OLC/tree/master/compiled2573 days ago
- ...n additional resource during training, meant to be distributed as a physical notebook. Participants (who favor the physical characteristics of dead tree material) could add their own...
2528 days ago
DarkHorse: a method for genome-wide prediction of horizontal gene transfer
...presented. The method is quantitative, reproducible, and computationally undemanding. It can be combined with genomic signature and/or phylogenetic tree-building procedures to improv...2509 days ago
slacTree: SVG Large Annotated Circular Tree drawing
...producing figures of large phylogenetic trees. While there are many other tree drawing programs, slacTree wa...publication quality figures of circular trees with more than 1000 taxa wit...for very small representations of entire trees or highly magnified regions...2498 days ago
iTOL: Interactive Tree Of Life
Interactive Tree Of Life is an online tool for the display, annotation and management of phylogenetic trees. Explore your trees directly in the browser, and...ograms or phylograms, exploring and navigating trees of any size is simple. http...2483 days ago
MGRA: Breakpoint graphs and ancestral genome reconstructions
...es for ancestral genomes at the internal nodes of the phylogenetic tree. The phylogenetic tree may be also specified complet...gene content. It also can reconstruct most plausible phylogenetic tree based on the rearrangement ch...2476 days ago
- RAMI, which clusters related nodes in a phylogenetic tree based on the patristic distance. RAMI also produces indices of cluster properties and other indices used in population and c...
2463 days ago
Computational Genomics: Applied Comparative Genomics
...w sequencing data. The course will focus on human genomics and human medical applications, but the techniques will be broadly applicable across the tree of life. The topics will incl...2349 days ago
MetaSim A Sequencing Simulator for Genomics and Metagenomics.
...r of different sequencing technologies. A population sampler optionally produces evolved sequences based on source genomes and a given evolutionary tree.2344 days ago
TeachEnG: Teaching Engine for Genomics
...ts and researchers understand key bioinformatics concepts. The current version includes interactive modules for sequence alignment and phylogenetic tree reconstruction algorithms, wi...2335 days ago
