2650 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
...g errors in sequencing. The method can be used for whole genome shotgun (WGS) sequencing data. They also show applicability of the method for variant calling and allele dosage estimation....2626 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...-Seq. UMI support in Strand NGS is end-to-end, spanning alignment to variant calling in DNA-Seq, and alignment to...FPE samples, UMI support in DNA-Seq enables the detection of somatic variants at low concentrations. In RN...2385 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery t...15/180/abstractPBHoney is an implementation of two variant-identification approaches des...clipped tails of long reads to identify structural variant...2623 days ago
2607 days ago
Pacbio Long Reads Compatible Software and Tools
...Bio data? Email us. Software categories: De novo assembly Structural Variations Detection Reference-based alignment Consensus and variant calling RNA analysis Epigenetic bas...2607 days ago
2591 days ago
simNGS and simLibrary – Software for Simulating Next-Gen Sequencing Data
simNGS is software for simulating observations from Illumina sequencing machines using the statistical models behind the AYB base-calling software. By default, observa...2349 days ago
Computational Genomics: Applied Comparative Genomics
The primary goal of the course is for students to be grounded in theory and leave the course empowered to conduct in...e of life. The topics will include genome assembly & comparative genomics, variant...2348 days ago
Harvest: a suite of core-genome alignment and visualization tools
Harvest is a suite of core-genome alignment and visualization tools for quickly analyzin...ands of intraspecific microbial genomes, including variant calls, recombination detectio...Interactive visualization of alignments, trees and variant...2339 days ago