Converting a VCF into a FASTA given some reference !
...(Heng Li) provides a Perl script vcfutils.pl which does this, the function vcf2fq (lines 469-528) This...e.g. this by David Eccles ./vcf2fq.pl -f <input.fasta>....com/lh3/samtools/blob/master/bcftools/vcfutils.pl2108 days ago
Bioinformatics tools for telomere to telomere assembly !
...riants (Yuanyuan Cheng @Yuanyuan929)● svpack – tools for filtering, comparing, and annotating structural variant (SV) calls in VCF format (Aaron Wenger)● J...984 days ago
Useful Bioinformatics Analysis Tools !
...TGC Compressor of collections of genomes given in Variant Call Format (VCF) files. • De...ge collections, Bioinformatics, 2013; 29(20):2572–2578, VCFShark Compressor of VCF files...855 days ago