3952 days ago
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
...edcentral.com/1471-2164/12/S2/S10 If you are more interested in exploring Markov Chain Exploration and understand it with graphical version please visit http://www.plane...3831 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...lescent process with recombination and geneconversion under various demographic mod...an 2 alleles please use the GenomePop program version. http://webs.uvigo.es/acraaj/...rtFREGENE is a forward-in-time simulator of inversions in population genetic data h...3743 days ago
List of In-silico Binding Site Prediction Tools
...oth a redundant and a non-redundant (sequence identity lower than 25%) version is available. Quaternary stru...ndly web interface (see the Web Server tab). It also has a stand-alone version, statically compiled for linu...3750 days ago
Commercial and public next-gen-seq (NGS) software
...n, repeat detection, and visualization tools. Version 3.0 was developed by Stefan K...eotides onto reference sequences. The updated version uses a BWT. Can call SNPs and...by Gabor Marth at Washington University. This version is specifically optimized for...3525 days ago
Apps for Busy Bioinformatics Researchers !!!
...de Email information about features to collaborators What's New in Version 1.8.1 This update is requi...sses the SGD service using a method that is changing in May 2013. This version provides changes to allow acc...3547 days ago
Software packages for next gen sequence analysis
...n, repeat detection, and visualization tools. Version 3.0 was developed by Stefan K...eotides onto reference sequences. The updated version uses a BWT. Can call SNPs and...by Gabor Marth at Washington University. This version is specifically optimized for...3248 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
..., have a private and public cloud version. Features: genomic data visua...n C and uses SAMtools API; latest version should work with diploid geno...Description: Improved Bayesian inversion somatic caller; unlike other...nts in noncoding Annotations; New version released July 2015; Command-l...2915 days ago
2875 days ago
Genome Assembly Tools and Software - PART1 !!
...uence assembly , DNA sequence analysis, contig editing, file format conversion and mutation detection....uence assembler that is designed for short reads. The single-processor version is useful for assembling geno...2692 days ago