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Install SibeliaZ in your Linux cluster !
By Jit 1434 days ago
(jitenv) jitendra@Bathymodiolus:~$ conda install -c bioconda sibeliaz
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): done
Solving environment: done
## Package Plan ##
environment location: /home/jitendra/.conda/envs/jitenv
added / updated specs:
- sibeliaz
The following packages will be downloaded:
package | build
---------------------------|-----------------
_anaconda_depends-2019.10 | py27_0 6 KB
anaconda-custom | py27_1 3 KB
ca-certificates-2020.12.8 | h06a4308_0 121 KB
certifi-2020.6.20 | pyhd3eb1b0_3 155 KB
maf2synteny-1.0 | he1b5a44_0 61 KB bioconda
openssl-1.1.1i | h27cfd23_0 2.5 MB
sibeliaz-1.2.2 | he1b5a44_0 101 KB bioconda
spoa-4.0.3 | he513fc3_0 103 KB bioconda
tbb-2020.3 | hfd86e86_0 1.1 MB
twopaco-0.9.4 | he1b5a44_0 374 KB bioconda
------------------------------------------------------------
Total: 4.5 MB
The following NEW packages will be INSTALLED:
_anaconda_depends pkgs/main/linux-64::_anaconda_depends-2019.10-py27_0
maf2synteny bioconda/linux-64::maf2synteny-1.0-he1b5a44_0
sibeliaz bioconda/linux-64::sibeliaz-1.2.2-he1b5a44_0
spoa bioconda/linux-64::spoa-4.0.3-he513fc3_0
twopaco bioconda/linux-64::twopaco-0.9.4-he1b5a44_0
The following packages will be UPDATED:
ca-certificates 2019.8.28-0 --> 2020.12.8-h06a4308_0
certifi pkgs/main/linux-64::certifi-2019.9.11~ --> pkgs/main/noarch::certifi-2020.6.20-pyhd3eb1b0_3
openssl 1.1.1d-h7b6447c_2 --> 1.1.1i-h27cfd23_0
tbb 2019.4-hfd86e86_0 --> 2020.3-hfd86e86_0
The following packages will be DOWNGRADED:
anaconda 2019.10-py27_0 --> custom-py27_1
Proceed ([y]/n)? y
Downloading and Extracting Packages
sibeliaz-1.2.2 | 101 KB | ######################################################################## | 100%
maf2synteny-1.0 | 61 KB | ######################################################################## | 100%
certifi-2020.6.20 | 155 KB | ######################################################################## | 100%
spoa-4.0.3 | 103 KB | ######################################################################## | 100%
ca-certificates-2020 | 121 KB | ######################################################################## | 100%
openssl-1.1.1i | 2.5 MB | ######################################################################## | 100%
anaconda-custom | 3 KB | ######################################################################## | 100%
_anaconda_depends-20 | 6 KB | ######################################################################## | 100%
twopaco-0.9.4 | 374 KB | ######################################################################## | 100%
tbb-2020.3 | 1.1 MB | ######################################################################## | 100%
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(jitenv) jitendra@Bathymodiolus:~$ sibeliaz
You must provide the input file name
(jitenv) jitendra@Bathymodiolus:~$ sibeliaz -h
Usage: [-k <odd integer>] [-b <integer>] [-m <integer>] [-a <integer>] [-t <integer>] [-f <integer>] [-o <output_directory>] [-n] <input file>
(jitenv) jitendra@Bathymodiolus:~$
