BOL

Walk-in Bioinformatics interview @ https://cdri.res.in/pdf/recruitment/Advt_01_2024_Project_Staff.pdf

#Learning and understanding #ANOVA online https://sphweb.bumc.bu.edu/otlt/mph-modules/bs/bs704_hypothesistesting-anova/bs704_hypothesistesting-anova_print.html

Interesting online plots idea https://chart-studio.plotly.com/create/#/ #Plots #Idea #Shiny #Draw

Mummer alignment to circos plotting https://github.com/metagenlab/mummer2circos #Mummer #Circos #Plot #Draw #Circular

Understanding expression data https://www.reneshbedre.com/blog/expression_units.html #Expression #RNASeq #NGS

https://hplgit.github.io/bioinf-py/doc/pub/html/main_bioinf.html #Learn #Python #Bioinformatics

Bioinformatics job https://www.timeshighereducation.com/unijobs/listing/328529/postdoctoral-researcher-in-plant-comparative-genomics-bioinformatics/ #postdoc

Minimizer-space de Bruijn graphs: Whole-genome assembly of long reads in minutes on a personal computer https://www.cell.com/cell-systems/fulltext/S2405-4712(21)00332-X #msDBG #Assembly #Genome

Bioinformatics Hackathon Africa https://dataleadafrica.com/programs/ #Africa #Hackthon

Count number of fasta sequence $ awk '/^>/ { f = !a[$0]++ } f' aaaa.fa > bbbb.fa #count #fasta #oneliner

Snakemake pipeline https://git.scicore.unibas.ch/zavolan_public/A-seq2-processing #A-Seq2 #Snakemake

Markov Chain Monte Carlo for Computer Vision http://homepages.inf.ed.ac.uk/rbf/CVonline/LOCAL_COPIES/DELLEART/MCMC_tutorial.htm #MCMC #Simulation

One can evaluate the accuracy of a mapper or a SNP caller with wgsim_eval.pl that comes with the package. #Evaluate #Mapping #SNP

Deep_learning course https://www.slideshare.net/TessFerrandez/notes-from-coursera-deep-learning-courses-by-andrew-ng #AI #DeepLearn

Multiline to singleline covert. $ awk '/^>/ {printf("%s%s\t",(N>0?"\n":""),$0);N++;next;} {printf("%s",$0);} END {printf("\n");}' < input.fa #Multi #Single #Convert #awk