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The Wire
#quality
Wire posts tagged with 'quality'
Jit
@jit.aber
Thread
By
Jit
1172 days ago
#Convert
#FASTQ
to FASTA and set bases of
#quality
lower than 20 to N $ seqtk seq -aQ64 -q20 -n N IN.fastq > OUT.fasta
BioJoker
@biojoker
Thread
By
BioJoker
2127 days ago
#CheckM
provides a set of tools for
#assessing
the
#quality
of
#genomes
recovered from isolates, single cells, or
#metagenomes
.
http:/
/
ecogenomics.github.io/
CheckM/
Jit
@jit.aber
Thread
By
Jit
2341 days ago
reformat.sh in=reads.fq out=highQuality.fq maq=16 (that will throw away all reads with average quality below 16)
#Filter
#BBMap
#Quality
Jit
@jit.aber
Thread
By
Jit
3009 days ago
Reads QC
http:/
/
evomicsorg.wpengine.netdna-cdn.com/
wp-content/
uploads/
2015/
01/
introQC.pdf
#Quality
#Reads
#NGS