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The Wire
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Jit
@jit.aber
Thread
By
Jit
2355 days ago
samtools view -f 256 Input.bam | awk '$6 ~/S/ && $7 == "=" {print $0}' > Secondary_clipped.sam
By Jit 2355 days agosamtools view -f 256 Input.bam | awk '$6 ~/S/ && $7 == "=" {print $0}' > Secondary_clipped.sam