Results for "Computational Biology"
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Arvados is a free and open source bioinformatics platform for genomic and biomedical data. User can Store | Organize | Compute | Share the data for free.Tags: Bioinformatics, Computational Biology, Big data, Analysis, Share, Run, Compute, Free, Arvados, Organise, Store
3506 days ago
Java utilities for Next Generation Sequencing by Pierre Lindenbaum
Java utilities for Bioinformatics https://github.com/lindenb/jvarkitTags: Bioinformatics, Computational Biology, Java, Utilities #Tools #Scripts #Pierre
3511 days ago
- Google Genomics provides an API to store, process, explore, and share DNA sequence reads, reference-based alignments, and variant calls, using Google's cloud infrastructure. Store alignments and variant calls for one genome or a million. Process genomic data in batch by running principal comp...
Tags: Bioinformatics, Computational Biology, Google, Genomics, Cloud
3480 days ago
Rosalind Bioinformatics problems !!!
Rosalind is a platform for learning bioinformatics and programming through problem solving. Take a tour to get the hang of how Rosalind works. http://rosalind.info/problems/list-view/Tags: Bioinformatics, Computational Biology, NGS, Genome, RNA-Seq, Algorithms, Online, Rosalind
3418 days ago
irishgrid: Irish Grid Mapping System
Perl module for creating geographic 10km-square maps using either SVG or PNG (with GD library) output format. Originally design to map the location of objects in a 10 km map IrishGrid includes: native support of the Irish Grid System (see http://www.osi.ie/) optimize for speed (there's as le...Tags: Bioinformatics, Computational Biology, Perl, Module, Map, Grid, Isris
3410 days ago
- ShRec3D is a program that aims at reconstructing a genome 3D structure (b) from the sole knowledge of the contacts between different genomic regions (a) as determined by Hi-C (http://www.ncbi.nlm.nih.gov/pubmed/19815776). There are two options to run ShRec3D (on linuX only so far): the first one...
Tags: Bioinformatics, Computational Biology, ShRec3D, 3D genome, Genome, Hi-C, Chromosome
3410 days ago
- RStudio IDE is a powerful and productive user interface for R. It’s free and open source, and works great on Windows, Mac, and Linux. The developers and expert trainers are the authors of several popular R packages, including ggplot2, plyr, lubridate, and others. More at http://www.rstudi...
Tags: Bioinformatics, Computational Biology, R, Module, CRAN, RStudio
3409 days ago
- The Bio.SeqLoc modules in seqloc are designed to represent positions and locations (ranges of positions) on sequences, particularly nucleotide sequences. My original motivation for writing these packages was handing the locations of genes in eukaryotic genomes. Handle sequence locations for bioi...
Tags: Bioinformatics, Computational Biology, Education, Sequence, Seq, Genome, View
3407 days ago
- Some of the useful bioinformatics scripts. For example ... contig-stats.pl is a Perl script that will automatically describe features of a sequence assembly. http://milkweedgenome.org/?q=scripts
Tags: Bioinformatics, Computational Biology, Education, Study, Script, Perl, Python
3352 days ago
- Chromosome number is a remarkably dynamic feature of eukaryotic evolution. Chromosome numbers can change by a duplication of the whole genome (a process termed polyploidy), or by single chromosome changes (ascending dysploidy via, e.g., chromosome fission or descending dysploidy via, e.g., chromo...
Tags: Bioinformatics, Computational Biology, Chromosome, Evolution, ChromEvol
3380 days ago
