Results for "Correct"
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...checks a number of properties that should hold true for a correct assembly (e.g., mate-pairs are aligned at the correct distance from each other in t...erall estimate of the likelihood a particular assembly is correct. Home Page: V...2773 days ago
- ...e parameters. For more information, refer to the manual. KmerGenie can be used to determine the best k-mer size, minimum abundance of correct k-mers, and genome size estim...
2696 days ago
- PANDASEQ assembles paired-end Illumina reads into sequences, trying to correct for errors and uncalled bases...be removed from the sequence during assembly. The final sequence will correct any uncalled bases in the ove...
2650 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
LoRDEC is a program to correct sequencing errors in long reads f...he PacBio read set, which is then corrected using the reference set. Ty...ly less substitutions. LoRDEC can correct errors of all these types. Af...ting the short reads, and seeks a corrective sequence for each erroneou...2573 days ago
WGS Celera Assembler version 8.3rc2
...rwxr-x 1 urbe urbe 23K Apr 10 11:41 cat-corrects-rwxrwxr-x 1 urbe urbe ...PBCNS-rwxrwxr-x 1 urbe urbe 197K Apr 10 11:41 correct-frags-rwxrwxr-x 1 urbe urbe 2...wxr-x 1 urbe urbe 13K Apr 10 11:40 show-corrects-rwxrwxr-x 1 urbe urbe 557K A...2573 days ago
- ...take in, how fast and how accurate they are. Bowtie is faster than BWA, but looses some sensitivity (does not map an equal amount of reads to the correct position in the genome).
2551 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
...ble to merge two or more assemblies in order to improve contiguity and correctness. It can be used on all NG...by merging them and selecting the generating that is most likely to be correct.2534 days ago
Pollux: platform independent error correction of single and mixed genomes
Pollux: General-purpose error corrector that corrects errors introduced by Illumina, Ion Torrent...ingle- or mixed-genome data. In addition to correcting substitution errors, we lo...ing projects. Using published data sets, we correct 94% of Illumina MiSeq errors,...2534 days ago
QuorUM: An Error Corrector for Illumina Reads
..., there is enough information in the reads to correct most of the sequencing errors...ly) easier. Here we use the term “error correction” to denote the reduc...oal. We evaluate the performance of QuorUM by correcting actual Illumina reads from...2361 days ago
- ...by developers for rapid feedback during annotation software development and testing. SOBA also provides annotation consistency feedback to ensure correct use of terminology within ann...
1374 days ago
