Results for "De Novo"

Tags

  • Want to Know which genome assembler rule the world ?

    Assemblathon 2: evaluating de novo methods of genome assembly  http://www.gigasciencejournal.com/content/2/1/10/abstract http://blogs.nature.com/news/2013/07/genome-assembly-contest-prompts-soul-searching.html http://assemblathon.org/post/44431915644/feedback-and-analysis-of-the-assemblat...

    Tags: Sequencing, DNA, Genome Assembly, Assembler, Omics, de novo

    1563 days ago

  • Platanus

    Platanus is a novel de novo sequence assembler that can reconstruct genomic sequences of highly heterozygous diploids from massively parallel shotgun sequencing data. The latest version is 1.2.4. To cite Platanus, please use the following: Kajitani R, Toshimoto K, Noguchi H, Toyoda A, Ogura Y,...

    Tags: Bioinformatics, NGS, Assembly, de novo, Sequence, Assembler, Heterozygous

    558 days ago

  • Meraculous: De Novo Genome Assembly with Short Paired-End Reads

    We describe a new algorithm, meraculous, for whole genome assembly of deep paired-end short reads, and apply it to the assembly of a dataset of paired 75-bp Illumina reads derived from the 15.4 megabase genome of the haploid yeast Pichia stipitis. More than 95% of the genome is recovered, wi...

    Tags: Meraculous, De Novo, Genome, Assembly, Short, Paired-End, Reads

    15 days ago