Results for "Functions"
Top-level pages
...determination of DNA and protein sequences, investigation of protein functions, development of pharmaceutica...function” cannot take into account proteins that have multiple functions depending on context (e.g., s...3938 days ago
- ...erosis, epistasis, pleiotropy and other interactions between loci and alleles within the genome. In contrast, the investigation of the roles and functions of single genes is a primary...
3933 days ago
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
...onnected by a phosphodiester bond.CpG islands are often located around the promoters of housekeeping genes (which are essential for general cell functions) or other genes frequently ex...3816 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...Materials from a series of mini-courses in R taught in 2010 at UCLA are available: Intro to programming and graphics Data manipulation and functions Graphics for exploratory dat...3771 days ago
List of In-silico Binding Site Prediction Tools
...ories) is out now. fpocket includes two other programs (dpocket & tpocket) that allow you to extract pocket descriptors and test own scoring functions respectively. Furthermore a n...3735 days ago
Next generation sequencing in R or bioconductor environment
...ets of biological sequences. The objects and functions provided by Biostrings form t...Documentation Rsamtools Rsamtools provides functions for parsing and inspecting sa...IP-seq or ChIP-chip experiments. It includes functions to retrieve the sequences aro...3616 days ago
Commercial and public next-gen-seq (NGS) software
...University. C source/Unix. MAQ - Mapping and Assembly with Qualities (renamed from MAPASS2). Particularly designed for Illumina with preliminary functions to handle ABI SOLiD data. Wri...3510 days ago
Apps for Busy Bioinformatics Researchers !!!
...as "Reverse Complement", "Jump to", "Copy and Paste sequences", fast and end scrolling, "Chromatogram adjustments", and "Searching for segments" functions. When used in combination wi...3533 days ago
Software packages for next gen sequence analysis
...iversity. C source/Unix. * MAQ - Mapping and Assembly with Qualities (renamed from MAPASS2). Particularly designed for Illumina with preliminary functions to handle ABI SOLiD data. Wri...3234 days ago
Comprehensive list of visualization tools for biological pathways
...and reactions. Activation of a pathway typically leads to a change of state in the cell. Pathways come in different flavors, depending on their functions in the cell – the three...2278 days ago
