Useful Publications and Websites for Deep Sequencing Data Analysis
...ge Genome-wide LORE1 retrotransposon mutagenesis and high-throughput insertion detection in Lotus japonicus....ing to allow use of Illumina sequencing to screen for retrotransposon insertion mutations, and includes a sof...3770 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...Genotype Data for Pedigree Structures http://www.hgsc.bcm.tmc.edu/content/simpedSimprot A program to simulate protein evolution by substitution, insertion and deletion http://www.uhnre...3728 days ago
2860 days ago
Quick next generation sequencing (NGS) terms definition
...pped to the reference genome by breaking into two sub-reads is called a split-read. These types of reads also indicate a potential SV or a short insertion or deletion (indel).read dept...2513 days ago
Edit distance application in bioinformatics !
...merau–Levenshtein distance allows insertion, deletion, substitution, and...subsequence (LCS) distance allows only insertion and deletion, not substitutio...the Levenshtein distance, but in addition to insertion, deletion and substitution, i...2332 days ago
Tools for bacterial whole genome annotation
...as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and ot...2322 days ago
Tools to Predict the Impact of Missense Variants !
...sh Combined Annotation Dependent Depletion (CADD)“CADD is a tool for scoring the deleteriousness of single‐nucleotide variants as well as insertion/deletions variants in the hum...2194 days ago