3933 days ago
Bioinformatics Courses Around the World
...matiikka/mbi/ DEGREE: Ph.D program in computational biology, bioinformatics, and biometryhttp://www.cs.helsinki.fi/combi/ Human Genome Mapping Project Resource Centre ...3934 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...cing-library preparation facilitates improved mapping and assembly of GC-biased gen...RNA-Seq gene expression estimation with read mapping uncertainty. Li et al, Bioinf...un genotyping for rapid and efficient genetic mapping. Andolfatto et al. Genome Res...3770 days ago
Commercial and public next-gen-seq (NGS) software
...ORE - SHORE, for Short Read, is a mapping and analysis pipeline for sho...er - GenomeMapper is a short read mapping tool designed for accurate re...tp://mummer.sourceforge.net/) The mapping short reads called gnumap (ht...caller" Transcriptomics ERANGE - Mapping and Quantifying Mammalian Tra...3510 days ago
Software packages for next gen sequence analysis
...c OS X. * SHORE - SHORE, for Short Read, is a mapping and analysis pipeline for sho...* GenomeMapper - GenomeMapper is a short read mapping tool designed for accurate re...exa) base caller" Transcriptomics * ERANGE - Mapping and Quantifying Mammalian Tra...3233 days ago
Comprehensive list of visualization tools for biological pathways
...http://tinyurl.com/vitapad/ Web tools for pathways ArrayXPath Mapping and visualizing microarray ge...bolic pathways http://metpa.metabolomics.ca Omics Viewer Data mapping on BioCyc pathways (collectio...2278 days ago
Binding Site Prediction in Protein !
...lable as a plugin for PyMOL Binding Site Prediction ConSurf Identification of functional regions in proteins by surface-mapping of phylogenetic information...2193 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...enomics master var file Read mapping: “In addition to Sanger...nd indels from sequencing and mapping errors, last update January 2...ad file, reference genome and mapping algorithm an experiment direc...P Description: animal gene mapping; “genomic prediction an...2899 days ago
2860 days ago
Genome Assembly Tools and Software - PART1 !!
...ing reference bias as compared to mapping based approaches. Tran...curacy comparable to conventional mapping based pipelines (see evaluati...al situations that may arise when mapping contigs to the reference geno...reference genome. This is done by mapping the contigs onto the referenc...2676 days ago