Results for "Protein Design"
Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
...ssc/index.htmlBEERS BEERS was designed to benchmark RNA-Seq alignme...e/software/bottlesim.htmlCASS Protein Sequence Simulation http://ww...to simulate the evolution of protein sequences under the constrain...q-gen.htmlDAWG An application designed to simulate the evolution of...3728 days ago
List of In-silico Binding Site Prediction Tools
...co Binding Site Prediction in Proteins tools CASTp : http://sts.bi...tion and structure-based drug design. Many computational methods fo...from the 9,708 non-redundant protein entries in the PDB database....ture-based approaches in drug design, we have processed the PDB to...3735 days ago
Commercial and public next-gen-seq (NGS) software
...Smith-Waterman-Gotoh) of DNA/protein against a reference. Authors...is a short read mapping tool designed for accurate read alignments...MAPper (gnumap) is a program designed to accurately map sequence d...ating the location of a bound protein of interest. Original algori...3510 days ago
Apps for Busy Bioinformatics Researchers !!!
...rowser, is a project that offers protein-protein physical/enzymatic interactio...ent project. This application is designed to allow you to search prote...Ontology, mutant phenotype, and protein and genetic interaction data...hone/iPad/iPod touch application designed for molecular biologists, b...3533 days ago
Software packages for next gen sequence analysis
...Smith-Waterman-Gotoh) of DNA/protein against a reference. Authors...is a short read mapping tool designed for accurate read alignments...MAPper (gnumap) is a program designed to accurately map sequence d...ating the location of a bound protein of interest. Original algori...3234 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all...n prediction of interaction sites on protein surface and tools for predict...ification of pockets and cavities in proteins structure, and quantitation...-based technique for the analysis of protei...2194 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...bels or genome-wide measures; designed to represent variation in on...l indels from diploid sample; designed to run on “nux-like pl...with predicted transcript and protein effects using third party to...: “GeneVetter is a tool designed for investigation of the ba...2900 days ago
Genome Assembly Tools and Software - PART1 !!
...genomes while the others are designed aiming at handling complex g...m Raw Reads REPdenovo is designed for constructing repeats dir...argeting assembly of specific protein-coding genes using a graph st...ontigs to the query reference protein. GRASP achieves much higher...2677 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be execut...grammers develop algorithms. Pseudocode is a "text-based" detail (algorithmic) design tool. The rules of Pseudocod...2650 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software. major/MySQLTuner...ultiple queues, and processing them later. perl6/specs - Perl 6 language design documents trizen/sidef ...2481 days ago
