Computer Aided Protein Structure Prediction; Identification of Vaccine
Candidates (T-Epitope prediction); Analysis of Nucleotide/Protein Sequences; Development of Web...arison of force field simulations. Analysis of DNA-protei...
Scientific Interests:
Models and software for predicting who is at risk of carrying...el models; decision theoretic approaches to inference; sequential experimental design and their application to adap...
In a lot of my work in bioinformatics, I have been using hidden Markov models (HMMs). As...(refs). Since then I have applied HMMs to membrane proteins (refs) and gene identificati...s and structure prediction are the main areas; and protei...
Efflux pumps (RND family)
Functioning of efflux systems in Gram-negative bacteria
Determinants of the compound...tions between antimicrobial peptides in the presence of different membranes
Protein-protei...
Mike Ritchie Lab primary research focus is the detection of susceptibility genes for common diseases such as cancer,...f gene-gene interactions associated with human disease.
Gene expression and protei...
Broad area of research:
Genome Annotation and Functional Genomics
Bergman Lab is actively engaged in the devel...in genome sequences. Bergman Lab work focuses on improving annotation of non-protei...
The Laboratoire de Bioinformatique des Génomes et des Réseaux (Genome and Network Bioinformatics) is specialized in...ic pathfinding, see also metabolic pathfinding in NeAT)
Critical assesment of protei...
DbBrowser: Attwood Lab research concerns protein sequence analysis, primarily using the method of protein 'fingerprinting'. DbBrowser: Attwood Lab main...RINTS), one of the founding partner of InterPro. We also design software to display sequence...
In our research, we combine computational methods with an experimental component in a unified effort to develop comp...Research Interest
Genomic Data Integration
Microarray Analysis
Gene and Protei...