Results for "Rearrangement"
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Destruct is a tool for joint prediction of rearrangement breakpoints from single or multiple tumour samples. More at https://bitbucket.org/dranew/destruct2978 days ago
- ...pair positions. Furthermore, multiple rearrangements in a single area of the geno...nbsp;their effects challenging. The Rearrangement Overview page describes the o...p; http://cancer.sanger.ac.uk/cosmic/help/rearrangement/overview
2763 days ago
- Mauve is a system for constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignments provide a...
1961 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
...ation. Such analyses are often based on whole-genome alignments to elucidate structural differences arising from insertions, deletions or from rearrangement events. Computational tools t...2654 days ago
MGRA: Breakpoint graphs and ancestral genome reconstructions
MGRA (Multiple Genome Rearrangements and Ancestors) is a tool for reconstructio...sertion and deletions in addition to genome rearrangements and allows the input genomes...st plausible phylogenetic tree based on the rearrangement characters.2467 days ago
- Chromosomal rearrangement events are caused by abnormal breaking and rejoining of DNA molecules. They are responsible for many of the cancer related diseases. Detecting the DNA...
2348 days ago
SVfinder: Tool for detecting genomic rearrangement form DNA-seq data
SVfinder provides genome-wide detection of structural variants from next generation paired-end sequencing reads.2324 days ago
- ...K, LINE, SCATTER, ARC, TEXT, and HISTGRAMmodules to display genome-wide genetic variations (SNPs, CNVs and chromosome rearrangement), gene expression and biomole...
2288 days ago
Reference-free prediction of rearrangement breakpoint reads
lideSort-BPR ( b reak p oint r eads) is based on a fast algorithm for all-against-all comparisons of short reads and theoretical analyses of...2241 days ago
- GRSR is a Tool for Deriving Genome Rearrangement Scenarios for Multiple Uni-chromosomal Genome...ed Permutations. Step 4. Generate pairwise genome rearrangement scenarios and find repeats at the breakpoints of each rearrangement events. https://github...
2036 days ago
