Jit
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GRSR: a tool for deriving genome rearrangement scenarios from multiple unichromosomal genome sequences
By Jit 2246 days ago
https://github.com/DanwangJessica/GRSR
GRSR is a Tool for Deriving Genome Rearrangement Scenarios for Multiple Uni-chromosomal Genomes. This tool will do the following steps:
- Step 1. Run mugsy to get multiple sequence alignment results.
- Step 2 & 3. Extraction of the Coordinates of Core Blocks, Construction of Synteny Blocks and Generating Signed Permutations.
- Step 4. Generate pairwise genome rearrangement scenarios and find repeats at the breakpoints of each rearrangement events.
