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Perl one-liner for bioinformatician !!!
...ileperl -pe '$_ .= "\n" unless /^$/' #double space a file except blank linesperl -pe '$_.="\n"x7' #7 space in a line.perl -ne 'print unless /^$/' #remove all blank linesperl -lne 'pri...3619 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...atabase version 2 (referred to as esp6400siv2), dbNFSP version 2.6 (referred to as ljb26), dbSNP version 138 (referred to as snp138) databases and remove all temporary files, and gene...2900 days ago
- ...h; show present working directory mkdir dir — make directory dir rm file — remove file rm -r dir — remove directory dir recursively&nbs...
2865 days ago
Bioinformatics Web Application Development with Perl
...s DBIx::Class sits on top of DBI to provide an API to your database based on the concept of queries and results. This is often sufficient to remove all but the most complicated...2313 days ago
PerlOneLiner for Bioinformatician
...'$_.="\n"x7' # Add a blank line before every lineperl -pe 's//\n/' # Remove all blank linesperl -ne 'print unless /^$/'perl -lne 'print if length'perl -ne 'print if /\S/' # Remove all consecutive blank lines,...2293 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
...you were just in pwd — show present working directory mkdir dir — make directory dir rm file — remove file rm -r dir — remove directory dir recursively cp...2272 days ago
- To remove all line ends (\n) from a Unix text file: sed ':a...olds.fasta | cut -f 4 -d '_' | paste -sd+ | bc To remove everything after the first sp...astdb. gunzip -c fasta.gz | makeblastdb -in - To remove sequences with duplicate fast...
2208 days ago
- ...inux-signed-image-4.4.0-116-generic runc ubuntu-fanUse 'sudo apt autoremove' to remove them.The following additional...tk8.6-blt2.5 ttf-bitstream-vera0 upgraded, 73 newly installed, 0 to remove and 35 not upgraded.Need to g...
2181 days ago
- ...ugin? [Y/N] N New password: password Re-enter new password: password Remove anonymous users? [Y/N] Y Disallow root login remotely? [Y/N] Y Remove test database and access to i...
598 days ago
