Results for "annotation"
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Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
To install BioPerl on a macOS system, you can follow these steps: Open the Terminal app on your macOS system. Install Homebrew if you haven't already...414 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...rest. Obtain the genome sequences: Download the genome sequences of the selected species from a public database, such as NCBI or Ensembl. Gene annotation: Annotate the genes in each g...415 days ago
Comment on "Basic command-line to run BLAST"
...rall, BLAST is a powerful tool for searching sequence databases and can be used for many different types of analyses, including gene annotation, functional annotation, and comparative genomics....415 days ago
Comment on "List of gene ontology software and tools"
GeneSCF serves as command line tool for clustering list of genes based on functional annotation (Geneontology, KEGG, REACTOME and NCG). This tool requires gene list in the form of Entrez Gene IDs or Official gene symbols as a input. http://genescf.kandurilab.org/1484 days ago
- ...sp; Set how annotation features should be displayed....
1512 days ago
Comment on "Running Trinity on RNA-seq !"
...ipts using Trinotate. If your organism has an assembled genome, consider using the Trinity transcriptome assemblies for gene structure annotation using PASA....2115 days ago
- First of all thanks for using GeneSCF. I am really sorry to say that current GeneSCF does not support new genome annotation. Since many users are requesting, it is possible that we may...
2626 days ago
- Gene Set Clustering based on Functional annotation (GeneSCF) ---------------------- 13/01/2017 --------------------------- Due to recent changes (naming convention i...
2653 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
For bacterial synteny -- MicroScope: Microbial Genome Annotation & Analysis Platform @ https://www.genoscope.cns.fr/agc/microscope/home/index.php2720 days ago
Comment on "List of gene ontology software and tools"
http://bioinformaticsonline.com/blog/view/28037/tool-gene-set-clustering-based-on-functional-annotation-genescf2863 days ago
