2795 days ago
BBTools for bioinformatician !
...es for BBDuk.sh BBDuk can operate in one of 4 kmer-matching modes:Right-trimming (ktrim=r), left-trimming (ktrim=l), masking (ktrim=n), and filtering (default). But it can only do...2262 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...;Systems biology: Systems approaches to molecular biology, multiscale modeling, pathways,gene networks. Computational Proteomics: Filtering and indexing sequence databas...3490 days ago
3225 days ago
Bioinformatics approach to Boar Taint
...de previousy identified QTL regions on SSC5,13, and 7 with the aid of FreeBayes , a variant caller tool. A final list of SNPs was prepared after filtering SNPs on the basis of SNP qual...3781 days ago
Genome Assembly Tools and Software - PART2 !!
...oforms. It achieves this by using an array of hash lengths, a dynamic filtering of noise, a robust resolution...ded in the sff file in order to ease the assembly process. It enables filtering sequences on different criter...2677 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...uite of utilities for comparing genomic features. Quinlan and Hall, Bioinformatics 26:841-842, 2010. Publisher Website Data quality assessment, filtering, and correction SolexaQA: At...3771 days ago
List of bioinformatics open source projects/software.
...tics software suite for the analysis of functional genomics experiments, e.g. RNA-seq or ChIP-seq. GeneTalk http://www.gene-talk.de/ Tool for filtering sequence variants in VCF file...3748 days ago
2354 days ago
3634 days ago
RA Bioinformatics at NATIONAL INSTITUTE OF BIOMEDICAL GENOMICS, INDIA
...tenance of a database for population- and diseaseassociated variation resource. Development of programmatic interface for querying the database, filtering of the results and identifica...2466 days ago
2066 days ago
1194 days ago
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq dataAfterQC can simply go through all fastq files in a folder and then output three folders: good, bad and QC folders, which contains good reads, bad reads and the QC results of each fastq fi...Tags: Automatic, Filtering, Trimming, Error, Removing, Quality, Control, fastq, data
2356 days ago
AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data AfterQC can simply go through all fastq files in a folder and then output three folders: good, bad and QC folders, which contains good reads, bad reads and the QC results of each fastq file/pair. Currently it suppo...Tags: Automatic, Filtering, Trimming, Error, Removing, Quality, Control, fastq, data
2129 days ago
1511 days ago
Comment on "nanofilt: Filtering and trimming of long read sequencing data"
Nanofilt steps https://gigabaseorgigabyte.wordpress.com/2017/06/05/trimming-and-filtering-oxford-nanopore-sequencing-reads/2031 days ago