3897 days ago
AIRVF: a filtering toolbox for precise variant calling in Ion Torrent sequencing
AIRVF that works on flowgram, raw and mapped reads and called variants to reduce artifact-driven false variant calls. Tests on sequencing data of standard reference mat...2317 days ago
NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore
...s gap extensions for longer gaps less than for shorter ones to compute precise alignments. The gap model all...variations at the same time and makes it especially effective at more precisely identifying the position of...2193 days ago
bpRNA: large-scale automated annotation and analysis of RNA secondary structure
bpRNA, a novel annotation tool capable of parsing RNA structures, including complex pseudoknot-containing RNAs, to yield an objective, precise, compact, unambiguous, easily-interpreta...2165 days ago
443 days ago