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• • Nitesh@prince26121991

  

  Nitesh is now a friend with Aaryan Lokwani 2107 days ago

  • Nitesh@prince26121991

  

  • Aaryan Lokwani@aaryan

  
• • Anjana@anjana

  

  Anjana is now a friend with Nitesh 2107 days ago

  • Anjana@anjana

  

  • Nitesh@prince26121991

  
• • Nitesh@prince26121991

  

  Nitesh is now a friend with Anjana 2107 days ago

  • Nitesh@prince26121991

  

  • Anjana@anjana

  
• • Abhimanyu Singh@abhimanyu

  

  Abhimanyu Singh commented on the blog Important Journals, Blogs and Forums for Bioinformaticians 2109 days ago

  NAR: Genomics and Bioinformatics publishes high quality research into genomics and bioinformatics, including novel computational or experimental methods and novel biological findings related to genomics, proteomics, transcriptomics, and...
• • Abhimanyu Singh@abhimanyu

  

  Abhimanyu Singh published a news post Caulobacter ethensis - 2.0 : Computer-generated Genome of a Living Organism 2109 days ago

  All the genome sequences of organisms known throughout the world are stored in a database belonging to the National Center for Biotechnology Information in the United States. As of today, the database has an additional entry: Caulobacter...
• • BioJoker@biojoker

  

  BioJoker bookmarked Flye: Fast and accurate de novo assembler for single molecule sequencing reads 2110 days ago

  Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The...

  https://github.com/fenderglass/Flye
• • Abhimanyu Singh@abhimanyu

  

  Abhimanyu Singh posted to the wire 2112 days ago

  Using R: #plotting the #genome on a line https://www.r-bloggers.com/using-r-plotting-the-genome-on-a-line/ . #plot #R
• • Neel@neelam

  

  Neel posted to the wire 2112 days ago

  Ten principles for machine-actionable #data management #plans https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1006750
• • BioJoker@biojoker

  

  BioJoker bookmarked OMTools: a software package for visualizing and processing optical mapping data 2114 days ago

  OMTools, an efficient and intuitive data processing and visualization suite to handle and explore large-scale optical mapping profiles. OMTools includes modules for visualization (OMView), data processing and simulation. These modules together form...

  https://github.com/TF-Chan-Lab/OMTools
• • Abhimanyu Singh@abhimanyu

  

  Abhimanyu Singh bookmarked ChIPulate: A Python3 framework to simulate read counts in a ChIP-seq experiment 2118 days ago

  ChIP-seq simulation pipeline, ChIPulate, we assess the impact of various biological and experimental sources of variation on several outcomes of a ChIP-seq experiment, viz., the recoverability of the TF binding motif, accuracy of TF-DNA binding...

  https://github.com/vishakad/chipulate
• • Abhimanyu Singh@abhimanyu

  

  Abhimanyu Singh bookmarked DISTRUCT: a program for the graphical display of population structure 2118 days ago

  distruct is a program that can be used to graphically display results produced by the genetic clustering program structure or by other similar programs. The figures produced by distructdisplay individual membership coefficients...

  https://rosenberglab.stanford.edu/distruct.html
• • BioJoker@biojoker

  

  BioJoker posted to the wire 2123 days ago

  Top 20 Python #AI and #Machine #Learning Open Source Projects https://www.dataquest.io/blog/top-20-python-ai-and-machine-learning-open-source-projects/
• • Jit@jit.aber

  

  Jit answered the question visiting scientist in bioinformatics 2123 days ago

  Hi osokefun, Seems to be an interesting project. I think, I could contribute in it. PM me at BOL. Cheers
• • osokefun@osokefun

  

  osokefun asked visiting scientist in bioinformatics 2127 days ago

  I am Dr Olusola B SOKEFUN, male, Nigerian with Lagos State University as an academic staff. I have recently concluded my PhD at the Federal University of Agriculture, Abeokuta in Ogun State Nigeria. My project topis is 'Phylogeny, Phylogeography...
• • BioJoker@biojoker

  

  BioJoker bookmarked plumber:An R package that converts your existing R code to a web API 2130 days ago

  plumber allows you to create a REST API by merely decorating your existing R source code with special comments. Take a look at an example. # plumber.R #* Echo back the input #* @param msg The message to echo #* @get /echo function(msg=""){...

  https://www.rplumber.io/
• • BioJoker@biojoker

  

  BioJoker posted to the wire 2130 days ago

  Rstudio package manager https://demo.rstudiopm.com/client/#/repos/4/packages/A3 #R #Studio #Package
• • Abhimanyu Singh@abhimanyu

  

  Abhimanyu Singh published a news post 200 point roster restored ! 2134 days ago

  The switch from department-wise (13-point and old) reservation to university-wise (200-point) to in faculty positions in universities and colleges is expected to make a big increase in SC/ST and OBC representation among teachers.
• • BioJoker@biojoker

  

  BioJoker bookmarked HipSTR: Haplotype inference and phasing for Short Tandem Repeats 2136 days ago

  HipSTR was specifically developed to deal with these errors in the hopes of obtaining more robust STR genotypes. In particular, it accomplishes this by: Learning locus-specific PCR stutter models using an EM algorithm Mining candidate...

  https://github.com/tfwillems/HipSTR
• • Jit@jit.aber

  

  Jit bookmarked SDA: Long-read sequence and assembly of segmental duplications 2138 days ago

  Segmental Duplication Assembler (SDA; https://github.com/mvollger/SDA) constructs graphs in which paralogous sequence variants define the nodes and long-read sequences provide attraction and repulsion edges, enabling the partition and assembly of...

  https://www.nature.com/articles/s41592-018-0236-3
• • Abhimanyu Singh@abhimanyu

  

  Abhimanyu Singh posted to the wire 2140 days ago

  Top 20 Python AI and Machine Learning Open Source Projects https://www.dataquest.io/blog/top-20-python-ai-and-machine-learning-open-source-projects/ #Projects #Open #Python #AI

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