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• • Rahul Nayak@rahul

  

  Rahul Nayak bookmarked Mulan: MUltiple sequence Local AligNment and conservation visualization tool 2733 days ago

  Mulan performs multiple (2 or more) sequence alignments with an efficient and rapid "full local" alignment strategy that ensures a recapitulation of evolutionary sequence rearrangements (such as inversions and reshuffling) in any of the species. It...

  https://mulan.dcode.org/mulanInstructions.php
• • EagleEye@santhilalsubhash

  

  EagleEye is now a friend with Poonam Mahapatra 2733 days ago

  • EagleEye@santhilalsubhash

  

  • Poonam Mahapatra@poonam

  
• • Poonam Mahapatra@poonam

  

  Poonam Mahapatra is now a friend with EagleEye 2733 days ago

  • Poonam Mahapatra@poonam

  

  • EagleEye@santhilalsubhash

  
• • Poonam Mahapatra@poonam

  

  Poonam Mahapatra posted to the wire 2733 days ago

  Bioinformatics faculty WalkIn https://www.pdkv.ac.in/Recruitment/wii-teachervncab-040717.pdf #WalkIn #Bioinformatics
• • EagleEye@santhilalsubhash

  

  EagleEye is now a friend with Rahul Nayak 2733 days ago

  • EagleEye@santhilalsubhash

  

  • Rahul Nayak@rahul

  
• • Rahul Nayak@rahul

  

  Rahul Nayak is now a friend with EagleEye 2733 days ago

  • Rahul Nayak@rahul

  

  • EagleEye@santhilalsubhash

  
• • Rahul Nayak@rahul

  

  Rahul Nayak posted to the wire 2734 days ago

  Remove "|" from fasta header. $ sed 's,|,_,g' -i file.fa #fasta #header #sed
• • Rahul Nayak@rahul

  

  Rahul Nayak posted to the wire 2734 days ago

  Remove unwanted character from fasta file. sed -e '/^[^>]/s/[^ATGCatgc]/N/g' file.fa #fasta #file #header #charater
• • Rahul Nayak@rahul

  

  Rahul Nayak posted to the wire 2734 days ago

  Evolution and phylogeny software http://tree.bio.ed.ac.uk/software/ #tools #software #phylogeny #evolution
• • Rahul Nayak@rahul

  

  Rahul Nayak bookmarked FigTree 2734 days ago

  FigTree is designed as a graphical viewer of phylogenetic trees and as a program for producing publication-ready figures. As with most of my programs, it was written for my own needs so may not be as polished and feature-complete as a commercial...

  http://tree.bio.ed.ac.uk/software/figtree/
• • Rahul Nayak@rahul

  

  Rahul Nayak answered the question How to download all mammalian protein fasta files ? 2734 days ago

  At UniProt search for taxonomy:mammalia in UniProtKB like this: http://www.uniprot.org/uniprot/?query=lineage%3Amammalia&sort=score There you can download a fasta file with all mammalian sequences with isoforms like...
• • Neel@neelam

  

  Neel asked How to download all mammalian protein fasta files ? 2734 days ago

  I want to download all the mammalian protein fasta files. Is there any quick way to download all in one click? 
• • Yeshodari@Yeshodari

  

  Yeshodari published a news post Webinar on Leukocyte immunobiology helps us predict post-operative risk using pre-operative markers... 2735 days ago

  Transcriptome analysis
• • Yeshodari@Yeshodari

  

  Yeshodari is now a friend with Rahul Nayak 2735 days ago

  • Yeshodari@Yeshodari

  

  • Rahul Nayak@rahul

  
• • Rahul Nayak@rahul

  

  Rahul Nayak is now a friend with Yeshodari 2735 days ago

  • Rahul Nayak@rahul

  

  • Yeshodari@Yeshodari

  
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on the blog Ancestral sequence reconstruction (ASR) or ancestral gene/sequence reconstruction/resurrection... 2735 days ago

  This wiki page is also very useful http://compbiolwiki.plos.org/wiki/Ancestral_reconstruction
• • Yeshodari@Yeshodari

  

  Yeshodari is now a friend with Jit 2735 days ago

  • Yeshodari@Yeshodari

  

  • Jit@jit.aber

  
• • Jit@jit.aber

  

  Jit is now a friend with Yeshodari 2735 days ago

  • Jit@jit.aber

  

  • Yeshodari@Yeshodari

  
• • Rahul Nayak@rahul

  

  Rahul Nayak bookmarked Mesquite: A modular system for evolutionary analysis 2735 days ago

  Mesquite is modular, extendible software for evolutionary biology, designed to help biologists organize and analyze comparative data about organisms. Its emphasis is on phylogenetic analysis, but some of its modules concern population genetics,...

  https://github.com/MesquiteProject/MesquiteCore/releases
• • Rahul Nayak@rahul

  

  Rahul Nayak bookmarked iTOL: Interactive Tree Of Life 2735 days ago

  Interactive Tree Of Life is an online tool for the display, annotation and management of phylogenetic trees. Explore your trees directly in the browser, and annotate them with various types of data. iTOL can easily visualize trees with 50'000...

  https://itol.embl.de/

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