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- Neel@neelam
Neel bookmarked The complete sequence of a human genome 1001 days ago

The completed regions include all centromeric satellite arrays, recent segmental duplications, and the short arms of all five acrocentric chromosomes, unlocking these complex regions of the genome to variational and functional studies.

https://www.science.org/doi/10.1126/science.abj6987
- Neel@neelam
Neel created a new bio-script Bash script to convert multiline fasta to single line fasta ! 1001 days ago
- Neel@neelam
Neel posted to the wire 1002 days ago

BLAST+ 2.13.0 now available with SRA BLAST, ARM Linux executables, and database metadata! https://loom.ly/O0WxVJI #NCBIBLAST
- Neel@neelam
Neel created a new bio-script Bash command to explore assembly summary genbank ! 1004 days ago
- Neel@neelam
Neel posted to the wire 1004 days ago

Ten quick tips for deep learning in biology https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009803 #Biology #Tools #Learn
- Neel@neelam
Neel posted to the wire 1004 days ago

Ten simple #rules for making a #software #tool #workflow-ready https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009823
- Neel@neelam
Neel posted to the wire 1004 days ago

Ten simple #rules for finding and selecting #R #packages https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009884
- Jit@jit.aber
Jit created a new bio-script Commands to Find and replace in file(s0) ! 1005 days ago
- Jit@jit.aber
Jit posted to the wire 1005 days ago

sed -i 's/2019/2020/g' test.txt test2.txt test3.txt #Find #Replace #sed
- Neel@neelam
Neel bookmarked Ten quick tips for deep learning in biology 1007 days ago

By taking a comprehensive and careful approach to deep learning based on critical thinking about research questions, planning to maintain rigor, and discerning how work might have far-reaching consequences with ethical dimensions, the life science...

https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009803
- Rahul Nayak@rahul
Rahul Nayak created a new bio-script Bash script to find difference between two files ! 1008 days ago
- Rahul Nayak@rahul
Rahul Nayak bookmarked Understanding HiFi Reads ! 1008 days ago

While little public data is available for either of the new synthetic long read approaches, Illumina showed an example comparison earlier this year at the Festival of Genomics & Biodata conference (FoG 2022). In the IGV screenshot...

http://pacb.com/blog/the-hifi-difference-true-long-reads-vs-synthetic-long-reads/
- Rahul Nayak@rahul
Rahul Nayak bookmarked Tiara: deep learning-based classification system for eukaryotic sequences 1018 days ago

With a large number of metagenomic datasets becoming available, eukaryotic metagenomics emerged as a new challenge. The proper classification of eukaryotic nuclear and organellar genomes is an essential step toward a better understanding of...

https://academic.oup.com/bioinformatics/article/38/2/344/6375939
- Rahul Nayak@rahul
Rahul Nayak commented on a bookmark chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes 1018 days ago

More at https://lakshay-anand.github.io/chromoMap/index.html
- Rahul Nayak@rahul
Rahul Nayak created a new bio-script Update conda ! 1020 days ago
- Rahul Nayak@rahul
Rahul Nayak posted a new ad in the Opportunity The Helsinki Summer School on Mathematical Ecology and Evolution 1023 days ago
- Rahul Nayak@rahul
Rahul Nayak commented on a bookmark Kraken: ultrafast metagenomic sequence classification using exact alignments 1025 days ago

Useful links https://genomics.sschmeier.com/ngs-taxonomic-investigation/index.html
- Rahul Nayak@rahul
Rahul Nayak created a new bio-script Command to run PERF ! 1027 days ago
- Rahul Nayak@rahul
Rahul Nayak created a new bio-script Bash command to count reads in fastq file ! 1027 days ago
- Rahul Nayak@rahul
Rahul Nayak posted a new ad in the ResearchLabs Bioinfo Lab 1029 days ago

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