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• • Jit@jit.aber

  

  Jit answered the question Why MeGAMerge terminated with minimus.fasta 1>/dev/null 2>/dev/null failed: error 2942 days ago

  Well, you might need to check the MeGAMerge log file for detail error message. Can you please reply with your error message from log file please?
• • Neel@neelam

  

  Neel asked Why MeGAMerge terminated with minimus.fasta 1>/dev/null 2>/dev/null failed: error 2942 days ago

  I am trying to merge contigs, generated from different assemblies with MeGAMerge, but it failed after running few hour !! Following are the error I got on command prompt. Any suggestions?? perl MeGAMerge-1.1.pl -f MergedDIR...
• • Neel@neelam

  

  Neel published a news post Bioinformatics Contest 2017! 2942 days ago

  Bioinformatics Contest 2017!
• • Jit@jit.aber

  

  Bulbul chose the best answer to the question How to resolve following Amos installation error ? 2943 days ago

  You need to do lil hacking, yes hack it ;) Add this in the front group of src/Align/find-tandem.cc script of AMOS #include <getopt.h>
• • Bulbul@bulbul

  

  Bulbul commented on the fun BioGeek Fun 2943 days ago

  How about this oneliner ;) perl -ne 'chomp;if( />(.*)/){$head = $1; $i=0; next};@a=split("",$_); foreach(@a){$i++;if($_ eq "N" && $s ==0 ){print "$head\t$i"; $s =1}elsif($s==1 && $_ ne "N"){print "\t$i\n";$s=0}}' infile.fa
• • Jit@jit.aber

  

  Jit answered the question How to resolve following Amos installation error ? 2943 days ago

  You need to do lil hacking, yes hack it ;) Add this in the front group of src/Align/find-tandem.cc script of AMOS #include <getopt.h>
• • Bulbul@bulbul

  

  Bulbul bookmarked MEME suite 2943 days ago

  Motif based sequence analysis suits  The MEME Suite allows the biologist to discover novel motifs in collections of unaligned nucleotide or protein sequences, and to perform a wide variety of other motif-based analyses. The MEME Suite...

  http://meme-suite.org/
• • Bulbul@bulbul

  

  Bulbul created a new bio-script Perl script to remove the duplicate sequences from multifasta file 2943 days ago
• • Bulbul@bulbul

  

  Bulbul asked How to resolve following Amos installation error ? 2943 days ago

  make[3]: Entering directory '/home/dept/Tools/amos-3.1.0/src/Align'g++ -DHAVE_CONFIG_H -I. -I../..  -I../../src/CelMsg -I../../src/Slice -I../../src/Common -I../../src/AMOS -I../../src/GNU -I../../src/Foundation   -g -O2 -MT...
• • Jit@jit.aber

  

  Jit posted to the wire 2943 days ago

  MACHTYPE variable to know what type of machine you are compiling the software on. echo $MACHTYPE #Linux #MACHTYPE
• • Bulbul@bulbul

  

  Bulbul posted to the wire 2943 days ago

  RA and SRF at Indian Institute of Wheat & Barley Research http://www.dwr.res.in/sites/default/files/events/walkinjan2017.pdf #SRF #RA #WalkIn #IIWBR
• • Bulbul@bulbul

  

  Bulbul commented on the blog Computational Proteomics : Lets remember the basics 2943 days ago

  One intersting periodic table here https://image-store.slidesharecdn.com/4d4490d7-6c08-4b54-be7e-bdd048182bc3-original.png
• • Amala Arumugam@Amala

  

  Amala Arumugam is now a friend with Neel 2943 days ago

  • Amala Arumugam@Amala

  

  • Neel@neelam

  
• • Neel@neelam

  

  Neel is now a friend with Amala Arumugam 2943 days ago

  • Neel@neelam

  

  • Amala Arumugam@Amala

  
• • Maryada Roy@maryadaroy

  

  Maryada Roy is now a friend with Jitendra Narayan 2943 days ago

  • Maryada Roy@maryadaroy

  

  • Jitendra Narayan@admin

  
• • Jitendra Narayan@admin

  

  Jitendra Narayan is now a friend with Maryada Roy 2943 days ago

  • Jitendra Narayan@admin

  

  • Maryada Roy@maryadaroy

  
• • Maryada Roy@maryadaroy

  

  Maryada Roy is now a friend with Neel 2943 days ago

  • Maryada Roy@maryadaroy

  

  • Neel@neelam

  
• • Neel@neelam

  

  Neel is now a friend with Maryada Roy 2943 days ago

  • Neel@neelam

  

  • Maryada Roy@maryadaroy

  
• • Jit@jit.aber

  

  Jit bookmarked Finding Patterns in Biological Sequences 2944 days ago

  In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA and proteins). We also provide biological motivation, and methods of biological verification of such patterns. Finally we list publicly...

  http://engr.case.edu/li_jing/papers/00798gpattern.pdf
• • Hardeep Kaur@hardeep

  

  Hardeep Kaur posted a new ad in the Opportunity Postdoc at UBritishColumbia in TroutGenomics 2944 days ago

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