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• • Neel@neelam

  

  Neel bookmarked PAired-eND Assembler for DNA sequences 3324 days ago

  PANDASEQ is a program to align Illumina reads, optionally with PCR primers embedded in the sequence, and reconstruct an overlapping sequence.   More at https://github.com/neufeld/pandaseq

  https://github.com/neufeld/pandaseq
• • Neel@neelam

  

  Neel posted to the wire 3324 days ago

  PAired-eND Assembler for DNA sequences https://github.com/neufeld/pandaseq #Sequence #Assembler #PANDAseq
• • Abhi@abhinav

  

  Abhi posted to the wire 3324 days ago

  #ConPADE: Genome #Assembly Ploidy Estimation from #Next-Generation Sequencing Data http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004229
• • Abhi@abhinav

  

  Abhi posted to the wire 3324 days ago

  Hapsembler http://compbio.cs.toronto.edu/hapsembler/hapsembler-2.1_manual.pdf
• • Abhi@abhinav

  

  Abhi posted to the wire 3324 days ago

  PLATform for Assembling NUcleotide Sequences http://platanus.bio.titech.ac.jp/ #Platanus #Assembler #Genome
• • Abhi@abhinav

  

  Abhi posted to the wire 3324 days ago

  A universal genomic #coordinate translator for comparative genomics https://github.com/nedaz/kraken #Genes #Translator #Synteny
• • Abhi@abhinav

  

  Abhi posted to the wire 3324 days ago

  Annotation transfer pipeline MAKER http://gmod.org/wiki/MAKER_Tutorial_2013 #Maker #Annotation #Pipeline
• • Thangapandi@Thangapandi

  

  Thangapandi is now a friend with Abhi 3324 days ago

  • Thangapandi@Thangapandi

  

  • Abhi@abhinav

  
• • Abhi@abhinav

  

  Abhi is now a friend with Thangapandi 3324 days ago

  • Abhi@abhinav

  

  • Thangapandi@Thangapandi

  
• • Nishi Singh@nishi

  

  Nishi Singh is now a friend with Priya Singh 3326 days ago

  • Nishi Singh@nishi

  

  • Priya Singh@priyasingh

  
• • Priya Singh@priyasingh

  

  Priya Singh is now a friend with Nishi Singh 3326 days ago

  • Priya Singh@priyasingh

  

  • Nishi Singh@nishi

  
• • Nishi Singh@nishi

  

  Nishi Singh posted a new ad in the Opportunity Research Fellow Bioinformatics 3326 days ago
• • Nishi Singh@nishi

  

  Nishi Singh posted a new ad in the Opportunity One-Year Internship In Computational Biology & Bioinformatics 3326 days ago
• • Nishi Singh@nishi

  

  Nishi Singh is now a friend with Thangapandi 3326 days ago

  • Nishi Singh@nishi

  

  • Thangapandi@Thangapandi

  
• • Thangapandi@Thangapandi

  

  Thangapandi is now a friend with Nishi Singh 3326 days ago

  • Thangapandi@Thangapandi

  

  • Nishi Singh@nishi

  
• • Archana Malhotra@archana

  

  Archana Malhotra posted to the wire 3328 days ago

  Dynamic programming http://www.avatar.se/molbioinfo2001/dynprog/dynamic.html #Programming #Alignment #Sequence #Dynamic
• • Jitendra Prajapati@jprajapati81

  

  Jitendra Prajapati bookmarked Awesome bioinformatics pipelines ! 3330 days ago

  A curated list of awesome pipeline toolkits ... https://github.com/pditommaso/awesome-pipeline

  https://github.com/pditommaso/awesome-pipeline
• • Jitendra Prajapati@jprajapati81

  

  Jitendra Prajapati posted a new ad in the Opportunity Wellcome Trust/DBT India Alliance Margdarshi Fellowships 2016 3331 days ago
• • Neel@neelam

  

  Neel answered the question Human chromosome length extractor ! 3332 days ago

  On linux OS you can extract human chromosome length with following command curl -s ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/chromInfo.txt.gz | gunzip -c
• • Jitendra Prajapati@jprajapati81

  

  Jitendra Prajapati answered the question Human chromosome length extractor ! 3334 days ago

  You can try fetchChromSizes for this purpose.

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