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If it is not fixed by Pradyuma approach. You could try following Type: execstack --version to check if you already have execstack installed. If you get command not found type: sudo apt-get install execstack -y --force-yes Type sudo execstack -c...

I agree with EagleEye. If you are using any online miRNA dataset, I mostly recommended to contact the authorised person.

I always try faSomeRecords, to extract. It is lil handy. See BIOCONDA https://bioconda.github.io/recipes/ucsc-fasomerecords/README.html

You can also try this, if you have lists of ids grep -A1 -w -f id.txt seqFile.fasta > output.fasta

install 32 bit version of java (dont remove 64 bit,Keep both) and make it default (sudo update-alternatives --config java) then try.

#Upgrade the current version of #Linux. $ sudo apt-get update && sudo apt-get upgrade

Check the upload and download stat in Linux. $ sudo apt-get install vnstat

Thanks for GeneSCF, it is really useful.  I am dealing with new genome, with priliminary annotations. The annotated ids are not universally accepted. Once I tried to convert the ids/sequence by matching online database, it fail as most of...

Bioinformatics jobs in New Zealand https://www.seek.co.nz/jobs?keywords=bioinformatics 

BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. The application is available...

ABACAS is intended to rapidly contiguate (align, order, orientate) , visualize and design primers to close gaps on shotgun assembled contigs based on a reference sequence. It uses MUMmer to find alignment positions and identify syntenies of assembly...

The hive plot is a rational visualization method for drawing networks. Nodes are mapped to and positioned on radially distributed linear axes — this mapping is based on network structural properties. Edges are drawn as curved links....

I always try faSomeRecords, to extract. It is lil handy. See BIOCONDA https://bioconda.github.io/recipes/ucsc-fasomerecords/README.html

maftools - An R package to summarize, analyze and visualize MAF files. Introduction. With advances in Cancer Genomics, Mutation Annotation Format (MAF) is being widley accepted and used to store variants detected. The Cancer Genome Atlas Project...

Try samtools $ samtools faidx multifile.fa $ samtools faidx multifile.fa Seq2 > Seq2.fa

Extract "Seq2" from the list...

install 32 bit version of java (dont remove 64 bit,Keep both) and make it default (sudo update-alternatives --config java) then try.

#Palindromes and genomic stress fractures http://www.sciencedirect.com/science/article/pii/S1568786406001558