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iMAGine - in silico MetAGenomics pipeline

https://github.com/avishekdutta14/iMAGine

iMAGine is a metagenomic workflow which includes filtering, assembling, and binning.

This workflow includes the following tools which are needed to be installed in the system.

  1. fastp
  2. spades assembler
  3. QUAST
  4. bwa
  5. samtools
  6. metabat2
  7. CheckM