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The Wire
BioStar
BioStar's wire posts
BioStar
@biostar
Thread
By
BioStar
425 days ago
#Multi
-line fasta to
#Single
-line Fasta $ awk '/^>/ {if (NR>1) print ""; printf("%s\n", $0); next; } { printf("%s", $0) } END { printf("\n"); }' multi_line.fasta > single_line.fasta
BioStar
@biostar
Thread
By
BioStar
434 days ago
Delete all the headers from multifasta file $ awk 'BEGIN {print ">"ARGV[1]};!/^>/{print}' test.fa
#fasta
#delete
#header
#multifasta
BioStar
@biostar
Thread
By
BioStar
438 days ago
Data resource for metagenomics benchmarking
https:/
/
ftp.ebi.ac.uk/
pub/
databases/
metagenomics/
taxon_benchmarking/
#Tools
#Metagenome
BioStar
@biostar
Thread
By
BioStar
489 days ago
Generate a
#quick
#monkeypox
#alignment
https:/
/
github.com/
aineniamh/
squirrel
BioStar
@biostar
Thread
By
BioStar
507 days ago
List of bioinformatics journals with impacts
https:/
/
scholar.google.com/
citations?view_op=top_venues&hl=en&vq=eng_bioinformatics
#Journals
#List
#Impact
BioStar
@biostar
Thread
By
BioStar
758 days ago
Public data repository
https:/
/
health.google.com/
covid-19/
open-data/
raw-data
#Data
#Repository
#Analysis
BioStar
@biostar
Thread
By
BioStar
772 days ago
Which human genome to opt for
http:/
/
lh3.github.io/
2017/
11/
13/
which-human-reference-genome-to-use
#Genome
#Human
BioStar
@biostar
Thread
By
BioStar
807 days ago
Interactive Linear Algebra Dan Margalit
https:/
/
textbooks.math.gatech.edu/
ila/
BioStar
@biostar
Thread
By
BioStar
870 days ago
#HUPAN
: a pan-genome analysis pipeline for human genomes
https:/
/
genomebiology.biomedcentral.com/
articles/
10.1186/
s13059-019-1751-y
BioStar
@biostar
Thread
By
BioStar
871 days ago
#HAIRSPLITTER
: SEPARATING NOISY LONG READS INTO AN UNKNOWN NUMBER OF
#HAPLOTYPES
https:/
/
hal-insa-rennes.archives-ouvertes.fr/
hal-03817928/
BioStar
@biostar
Thread
By
BioStar
871 days ago
Now 400,000
#Salmonella
genomes available for analysis on Enterobase‼️
https:/
/
enterobase.warwick.ac.uk
BioStar
@biostar
Thread
By
BioStar
1316 days ago
RNA seq tutorial
https:/
/
github.com/
griffithlab/
rnaseq_tutorial
#Tutorial
#RNA_seq
BioStar
@biostar
Thread
By
BioStar
1320 days ago
HOW TO CONVERT A PYTHON SCRIPT TO MODULE
https:/
/
tutswiki.com/
convert-python-script-to-module/
#Module
#Python
BioStar
@biostar
Thread
By
BioStar
1321 days ago
DOME: recommendations for supervised machine learning validation in biology
https:/
/
www.nature.com/
articles/
s41592-021-01205-4
#Machine
#Learn
#Recommendation
BioStar
@biostar
Thread
By
BioStar
1321 days ago
Genome assembly PPT
http:/
/
rayan.chikhi.name/
pdf/
2018-evomics-assembly-kmers.pdf
#Genome
#Assembly
#PPT
#Ryan
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