Jit
Enthusiast computational biologist with business dream !!!
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A powerful, yet simple, gene set analysis tool for interpreting RNA-seq and NGS results.
By Shani 3656 days agoLifeMap Sciences is introducing GeneAnalytics, our new gene set analysis tool, which is applicable for NGS results and differentially expressed gene lists from variable sources. GeneAnalytics provides gene associations with tissues &...Assistant Professor in Medical Bioinformatics
Advt. No : ME-I/A-IV/03/14 No.of Posts:01 (SC) Pay Scale: Pay Band of Rs.15600-39100 + Rs.6000/- GP +NPA @ 25% of Basic Pay +Learning Resource Allowance @ Rs.20,000/-P.A.+ Conveyance Allowance @ Rs. 1650/-P.M.+ Academic Allowance @ Rs.2500/- P.M....karyoploteR: plot whole genomes with arbitrary data
By Abhimanyu Singh 2465 days agobernatgel.github.io - karyoploteR is an R package to create karyoplots, that is, representations of whole genomes with arbitrary data plotted on them. It is inspired by the R base graphics system and does not depend on other graphics packages. The aim of karyoploteR...Postdoc position at Centre Méditerranéen de Médecine Moléculaire
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By Abhimanyu Singh 2720 days agogithub.com - GRASS (GeneRic ASsembly Scaffolder)-a novel algorithm for scaffolding second-generation sequencing assemblies capable of using diverse information sources. GRASS offers a mixed-integer programming formulation of the contig scaffolding problem, which...
List of visualization tools for genome alignments
Last updated 2465 days ago by Rahul NayakGenome browsers are useful not only for showing final results but also for improving analysis protocols, testing data quality, and generating result drafts. Its integration in analysis pipelines allows the optimization of parameters, which...Pimp your brain: Bioinformatics
By Neel 3726 days agoJan Lisec from the Max Planck Institute of Molecular Plant Physiology explains, in this "pimp your brain" episode, what bioinformatics is and why bioinformatics is so important and indispensable for biological research. In the video serial "Pimp...pbalign: maps PacBio reads to reference sequences and saves alignments to a BAM file
By Jit 2354 days agogithub.com - pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. The output Compare HDF5 file...Center for Molecular Dynamics Nepal (CMDN), Nepal
Center for Molecular Dynamics Nepal (CMDN), established 2007 prides itself as a research driven nongovernmental organization. Unlike other civil society organizations, CMDN is dedicated entirely to promoting research in the country. With its team of...
