Rahul Nayak
A Bioinformatician
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Bioinformatics, Computational Biology, R, India, Research, Protein, Genomics, Education, ribosomal, RNA, Yale, Genetic Code, New Genome, Biology, DNA, NCBI, PubMed, BEReX, Biomedical, Entity-Relation, eXplorer, C-DAC, Param Bio Blaze, Supercomputing, R 3.0.3, Upgrade, New, Version, Neuron, Infection, Africa, Outbreak, Disease, Virus, Interactive, IPython, Notebooks, SPSS, Translate, Migrate, Code, Stats, Package, Pacman, Study, Degree, BINC, Examination, 2015, Certificate
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Github replacement !
By Rahul Nayak 1675 days ago
For a number of reasons researchers have been trying out GitLab as a replacement for for both GitHub and various continuous integration systems, and have been exploring configurations useful for model-fitting pipelines. Researchers turned one of these into an example repository that shows how to use GitLab together with the Rocker Docker images and the drake build system to reproducibly run a project pipeline, using the cacheing functionality across all three tools to make things reasonably speedy and enable both local and remote builds.
Check it out at https://gitlab.com/ecohealthalliance/drake-gitlab-docker-example.
