Rahul Agarwal
I'm a Bioinformatician and Programmer
Our Sponsors
Related items
FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
By Jit 1791 days agobioinfo.ut.ee - FastGT is a program package for whole-genome genotyping of genome variants directly from raw sequencing reads. It is written in C and runs in Linux. FastGT uses a list of variant-specific k-mer pairs that are unique in human genome, counts the...HASLR: a hybrid assembler which uses both second and third generation sequencing reads
By BioStar 1694 days agogithub.com - HASLR, a hybrid assembler which uses both second and third generation sequencing reads to efficiently generate accurate genome assemblies. Our experiments show that HASLR is not only the fastest assembler but also the one with the lowest number of...Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data
By Jit 1410 days agogithub.com - Ktrim is written in C++ for GNU Linux/Unix platforms. After uncompressing the source package, you can find an executable file ktrim under bin/ directory compiled using g++ v4.8.5 and linked with libz...Post doc in Computational Genetics and Genomics at CEINGE Biotecnologie Avanzate, Naples, Italy
We are seeking one motivated scientist to analyze genomics and transcriptomics data of a large collection of neuroblastoma tumors. The successful candidate will be part of a team of researchers with extensive expertise in genome cancer study. He/she...Step-by-Step Guide to Detect piRNAs Using Bioinformatics
By Abhi 9 days agoDetecting piRNAs involves a combination of computational and analytical methods to identify these unique small RNAs and their roles in gene regulation and transposable element suppression. By following this step-by-step guide, you can confidently...Genomic Open-source Breeding informatics initiative
By BioStar 1446 days agocbsugobii05.biohpc.cornell.edu - To build open-source genomic data management and analysis tools to enable breeders to implement genomic and marker-assisted selection as part of their routine breeding programs. To transform breeding by connecting diverse data with precision...SVfinder: Tool for detecting genomic rearrangement form DNA-seq data
By Robert M Willioms 2565 days agogithub.com - SVfinder provides genome-wide detection of structural variants from next generation paired-end sequencing reads.Sandelin group
Sandelin group have a deep interest in most biology, but focus on gene regulation and the many areas that are connected with this, including transcriptomics, epigenetics and technological and informatics aspects. The group is both computational...Liu Lab
Shirley is a computational biologist with expertise in cancer epigenetics. Her research focuses on algorithm development and integrative mining from big data generated on microarrays, massively parallel sequencing, and other high throughput...The Minerva Research Group for Bioinformatics (Janet Kelso)
The focus of this group is to use computational approaches to gain an insight into genome evolution in primates. PNAS...
