BOL

Walk-In Interview for one position of Junior Research Fellow (JRF) in a SERB, Department of Science and Technology (DST) funded research project entitled “Design and evaluation of novel Beta-3 adrenoreceptor agonists for potential antidepressant...

One profile of Computational/Systems Biology and Machine Learning at Postdoc level is needed at the Laboratory of Immunobiology of Neurological Disorders led by Cinthia Farina, Institute of Experimental Neurology, Ospedale San Raffaele, Milano. The...

INSTITUTE OF ADVANCED STUDY IN SCIENCE AND TECHNOLOGY (An Autonomous Institute under Department of Science and Technology, Govt. of India) Paschim Boragaon, Garchuk, Guwahati-781035 Appointment Adv.No.2 Applications in plain paper are...

Bioinformatician uses servers for computational analysis. Sometime we need to check the server details before running our programs or tools. Here I am showing some basic commands using them you can gather the system/server information.To check what...

github.com - MashMap is a fast and approximate software for mapping long reads (PacBio/ONT) or assembly to reference genome(s). It maps a query sequence against a reference region if and only if its estimated alignment identity is above a specified threshold. It...

bowtie2 -x hs37m -X 650 -q -1 r1.fq -2 r2.fq -S r12.bowtie2.sam bwa aln hs37m.fa r1.fq > r1.sai && bwa aln hs37m.fa r2.fq > r2.sai \ && bwa sampe hs37m r1.sai r2.sai r1.fq r2.fq > r12.bwa.sam bwa bwasw...

Science for Life Laboratory (SciLifeLab) is a national center for molecular biosciences with focus on health and environmental research. The center combines frontline technical expertise with advanced knowledge of translational medicine and...

github.com - Third generation sequencing (TGS) are highly promising technologies but the long and noisy reads from TGS are difficult to align using existing algorithms. Here, we present COSINE, a conceptually new method designed specifically for aligning long...

ncbi.github.io - Magic-BLAST is a tool for mapping large next-generation RNA or DNA sequencing runs against a whole genome or transcriptome. Each alignment optimizes a composite score, taking into account simultaneously the two reads of a pair, and in case of...

Mapping reads to a reference genome is an essential step in many types of genomic analysis, such as variant calling and gene expression analysis.