github.com - Binaries of ngs-bits are available via Bioconda. Alternatively, ngs-bits can be built from sources:
Binaries for Linux/macOS
From sources for Linux/macOS
From sources for Windows
bioinformatics-core-shared-training.github.io - One of the best tutorial for beginners ...
https://bioinformatics-core-shared-training.github.io/cruk-summer-school-2017/Day1/Session4-seqIntro.html
pevsnerlab.kennedykrieger.org - DRAGON: Database Referencing of Array Genes Online
SNOMAD: Standardization and Normalization of Microarray Data
SNPduo: SNP Analysis Between Two Individuals
SNPtrio: Analyzing and Visualizing and Inheritance Patterns in Trios
SNPscan: Data...
zuguang.de - This is the documentation of the circlize package. Examples in the book are generated under version 0.4.1.
If you use circlize in your publications, I would be appreciated if you can cite:
Gu, Z. (2014) circlize implements and...
christophergandrud.github.io - You can also create Sankey diagrams with sankeyNetwork. Here is an example using downloaded JSON data:
https://en.wikipedia.org/wiki/Sankey_diagram
http://higlass.io/ - HiGlass is a tool for exploring genomic contact matrices and tracks. Please take a look at the examples and documentation for a description of the ways that it can be configured to explore and compare contact matrices. To load private data, HiGlass...
osprey.thebiogrid.org - Osprey is a software platform for the visualization of complex biological interaction networks. Osprey builds data-rich graphical representations from Gene Ontology (GO) annotated interaction data maintained by the BioGRID.
Osprey is...
github.com - Juicebox is visualization software for Hi-C data. This distribution includes the source code for Juicebox, Juicer Tools, and Assembly Tools. Download Juicebox here, or use Juicebox on the web. Detailed documentation is...
Instead of showing a genome as one long, confusing sequence, it displays different genomic paths like routes on a metro map. Where sequences are shared, the paths travel together. Where genetic variation occurs, they branch into different routes...
academic.oup.com - Motivation: The Oxford Nanopore MinION device represents a unique sequencing technology. As a mobile sequencing device powered by the USB port of a laptop, the MinION has huge potential applications. To enable these applications, the...