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Rosalind is a platform for learning bioinformatics and programming through problem solving. Take a tour to get the hang of how Rosalind works. Bioinformatics Textbook Track Find more about Rosalind puzzle at...

github.com - Generate unique k-mers for every contig in a FASTA file. Unique k-mer is consisted of k-mer keys (i.e. ATCGATCCTTAAGG) that are only presented in one contig, but not presented in any other contigs (for both forward and reverse strands). This tool...

Applications are invited from Indian nationals for the post of Research Assistant (on contract) in research project entitled “Identification of novel drug targets in Aspergillus fumigatus genome prioritized by essentiality based screening and...

github.com - Perform Alignment-free k-tuple frequency comparisons from sequences. This can be in the form of two input files (e.g. a reference and a query) or a single file for pairwise comparisons to be made.

Research Associate International Centre for Genetic Engineering and Biotechnology (ICGEB) Address: Aruna Asaf Ali Marg, Jawaharlal Nehru University, New Delhi Postal Code: 110067 City: New Delhi State: Delhi Qualifications: Experience in many...

github.com - Just import the assembly, bam and ALE scores. You can convert the .ale file to a set of .wig files with ale2wiggle.py and IGV can read those directly.  Depending on your genome size you may want to convert the .wig files to the BigWig format.

Research Associate Statistics Eligibility : M Phil / Phd, MSc Location : Delhi Last Date : 27 Jun 2015 Hiring Process : Walk - In Indian Agricultural Statistics Research Institute (IASRI) - Job DetailsDate of posting:03 Jun...

To find repeats in a genome from 2 to 9 length using a Perl script, you can use the RepeatMasker tool with the "--length" option[0]. Here's a step-by-step guide: Install RepeatMasker: First, you need to install RepeatMasker on your system. You...

Research Associate Position at ICGEB, New Delhi with Dr. Amit Sharma Starting 15th July 2015, the position relates to a project specifically for in silico drug docking, screening, design, optimisation and linkage with active chemists....

FASTA VALIDATOR + SEQKIT RMDUP: FASTA validation GENOMETOOLS GT GFF3VALIDATOR: GFF3 validation ASSEMBLATHON STATS: Assembly statistics GENOMETOOLS GT STAT: Annotation statistics NCBI FCS ADAPTOR: Adaptor contamination pass/fail NCBI...